Variovorax sp. PMC12: C4F17_07595
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Entry
C4F17_07595 CDS
T05380
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_07595
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_07595
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_07595
Enzymes [BR:
vam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
C4F17_07595
Amino acid related enzymes [BR:
vam01007
]
Aminoacyl-tRNA synthetase
Class I (G)
C4F17_07595
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C4F17_07595
Prokaryotic type
C4F17_07595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
AVQ80822
LinkDB
All DBs
Position
1:complement(1630628..1632004)
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AA seq
458 aa
AA seq
DB search
MSLRIYNTLSRELEEFSPLQPGQVRMYVCGMTVYDFCHIGHARMMMAFDVVQRWLRASDY
AVTYVRNITDIDDKIIARSVQRGITIRQLTDEVIAAMHEDIGALGIEPPTIEPRATEYVP
QMLGIIQKLEQKGLAYRSENGDVNYAVRKFPGYGKLSGKSLDELHAGERVAVLDGKQDPL
DFVLWKAAKPTEPADAKWESAYGTGRPGWHIECSAMSCATLGETFDIHGGGADLQFPHHE
NEIAQSEGANGKPLSRFWVHNGFVRVDNEKMSKSLGNFFTIREVLQKYDAESLRFFLVRT
HYRSALNYSDAHLDDARNSLKRLYTALDLVAPAEVAIDWTQPYAARFKAAMDEDFGTPEA
IAVLFELAGEVNRTKSAETAGLLKALAGSLGLLQGDPRAFLQAGSTLDDAAIQARIAERA
AAKAAKNFAEADRIRQELLEQGIVLKDSPTGTTWAAAQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcgcatctacaacacgctgtcgcgtgaattggaggaattctcccccctgcaa
cccggacaggtgcgcatgtacgtttgcggcatgacggtctacgatttctgccacatcggc
cacgcccgcatgatgatggcgttcgacgtggtgcagcgctggctgcgcgccagcgactat
gccgtgacctacgtgcgcaacatcaccgacatcgacgacaagatcatcgcccgctccgtg
cagcgcggcatcaccatccgccagctgaccgacgaagtgatcgcggccatgcacgaggac
atcggcgcgctcggcatcgagccgcccaccatcgagccgcgcgccaccgagtacgtgccg
cagatgctcggcatcatccagaagctggagcagaagggcctggcctatcgctccgagaac
ggcgacgtgaactacgcggtgcgcaagttcccgggctacggcaagctgtcgggcaagtcg
ctcgacgaactgcatgcgggcgagcgcgtggccgtgctcgacggcaagcaggacccgctc
gacttcgtgctctggaaggccgccaagccgactgagcccgcagacgccaaatgggaaagc
gcctatggcaccggccggccgggctggcacatcgagtgctcggccatgagctgcgcgacc
ttgggcgagaccttcgacatccacggcggcggcgccgacctgcagtttccgcatcacgag
aacgagattgcccagagcgaaggcgccaacggcaagccgctgtcgcgcttctgggtgcac
aacggcttcgtgcgcgtggacaacgagaagatgtccaagagcctggggaacttcttcacc
atccgcgaagtgctgcagaagtacgacgccgagagcctgcgcttcttcctggtgcgcacg
cattaccgcagcgcgctcaactacagcgacgcgcacctggacgacgcccgcaattcgctc
aagcgcctgtacaccgcgctcgatctcgtcgcaccggccgaagtcgccatcgactggacc
cagccctatgccgcgcgcttcaaggcggccatggacgaggacttcggcacgcccgaagcc
attgccgtgctgttcgagctggccggcgaagtcaaccgcaccaagtccgccgagaccgcg
ggcctgctgaaggcgctggccggttcgctgggcttgctgcagggcgatccgcgggcgttc
ctgcaggccggcagcacgctggacgacgcggccatacaggcccgcatcgccgagcgtgcc
gctgccaaggcggcgaagaatttcgccgaagccgatcgcattcgccaggaactcctcgag
cagggcatcgtgctcaaggactcgcccacgggaaccacctgggcggccgcgcagtga
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