Variovorax sp. PMC12: C4F17_08070
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Entry
C4F17_08070 CDS
T05380
Name
(GenBank) amidase
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00330
Arginine and proline metabolism
vam00360
Phenylalanine metabolism
vam00380
Tryptophan metabolism
vam00627
Aminobenzoate degradation
vam00643
Styrene degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
C4F17_08070
00360 Phenylalanine metabolism
C4F17_08070
00380 Tryptophan metabolism
C4F17_08070
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
C4F17_08070
00643 Styrene degradation
C4F17_08070
Enzymes [BR:
vam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
C4F17_08070
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GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
AVQ80907
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Position
1:1728478..1730025
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AA seq
515 aa
AA seq
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MNAAPNTSPAAAELVEQSAVELRRLIGSKEISPVELLEACIARIERVNPFVNAVTATCFE
RARAEAKGAESAVMRGDPLGLLHGLPLGVKDLEPTQGLLTTWGSAIYRDHVPAEDIELVA
RLRRAGAIVTGKTNVPEMGAGANSRNEVWGATGNPFNPNLNAGGSSGGSAAALACDMLPV
CTGSDTGGSLRIPAAKCGVVGFRPSPGIVPSVRKPLGWTPISVVGPMGRTVEDACLQLAA
SAGMHAGDPLSHPLDPLSFRKTAPVDLANLRVAWTEDFGTCAVDDRIRATFCRKIEAMRH
LFRRCDKVEFDMGEAHRCFDVLRAEAFVAGMQAAYERNPNSLGPHSRANYEMGAQMSLLD
SAWAQAEQTRLLKRFQATFADYDLVLSPTTPVSPFPWTQPYADTINGEKQANYYRWLALT
YVVTLTTHPAISLPCGVDHAGMPFGLQVVGGFRMDHQVLGAAHAMEAAFSRDAQLRRPRP
DLAALRAAEPALTSIVTTPPVFDRGLMETAAISAV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagcaccgaacacatcgccagccgccgccgagctcgtcgagcaatccgccgtc
gaattgcgccgcctcatcggcagcaaggagatctcgccagtagaactgctggaagcatgc
atcgcgcgaatcgaacgcgtgaaccccttcgtcaacgcggtgaccgccacctgtttcgaa
cgcgcgcgcgcggaagccaaaggcgcggaaagcgcggtcatgcgcggcgacccgctagga
ctgctgcacgggctgccgctgggcgtgaaagacctcgagcccacgcagggcctgctcacg
acctggggctccgccatctatcgcgaccacgtgcccgcggaagacatcgaactggtggcc
cgcctgcgccgcgcgggcgccatcgtgacgggcaagaccaacgtgccagagatgggcgcg
ggcgccaactcgcgcaacgaagtgtggggcgccaccggcaaccccttcaaccccaacctg
aatgcgggcggctcttcgggcgggtcggcggcggcgctggcctgcgacatgctgcccgtg
tgcaccggctccgacaccggcggctcgctgcgcattcccgcggccaagtgcggcgtggtg
ggcttccggccttcgccgggcatcgtgccgagcgtgcgcaagccgctgggctggaccccg
atttcggtcgtcggccccatgggccgcacggtggaagatgcgtgcctgcagctggccgcc
tccgccggcatgcacgcgggcgacccgctcagccacccgctggacccgttgtcctttcgc
aaaacggctccggtcgaccttgccaacctgcgcgtggcatggaccgaagacttcggcacc
tgcgcggtggacgaccgcatccgcgccactttctgccgcaagatcgaggccatgcggcac
ttgttccggcgctgcgacaaggtcgagttcgacatgggcgaggcgcatcgctgcttcgac
gtgctgcgcgccgaggccttcgtggcgggcatgcaggcagcctacgagcgcaaccccaac
agcctgggcccgcactcgcgcgcgaactacgaaatgggcgcgcagatgagcctgctcgac
agcgcctgggcgcaggccgagcagacccggcttctcaagcgcttccaggcgaccttcgcc
gactacgacctcgtgctgtcgccgaccaccccggtctcgcccttcccctggacgcagccg
tacgccgacaccatcaacggcgagaagcaagccaactactaccgctggctggcgctgacc
tacgtggtcacgctcacgacgcacccggcgatctcgctgccttgcggcgtcgaccacgca
ggcatgcccttcgggctgcaggtcgtgggcggattcaggatggaccaccaggtgctgggt
gcggcgcatgccatggaggcggcgttctctcgcgatgcgcagctgcgcaggccgcgcccc
gacctggccgcgctgcgagcggcggagcctgccttgacatcgatcgtcacgacaccgccc
gtcttcgaccgcggcctcatggagacagccgcgatatcggctgtctga
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