Variovorax sp. PMC12: C4F17_08270
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Entry
C4F17_08270 CDS
T05380
Name
(GenBank) hemolysin D
KO
K11068
hemolysin III
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vam02042
]
C4F17_08270
Bacterial toxins [BR:
vam02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Other
C4F17_08270
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GFIT
Motif
Pfam:
HlyIII
Motif
Other DBs
NCBI-ProteinID:
AVQ80943
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All DBs
Position
1:1774561..1775184
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AA seq
207 aa
AA seq
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MYPGERLNGYSHLLGLLLALSATALLLAKTVPTGDPARIAGALVFSLSAVALYAASTLFH
STRGRLKRVWERADHCAIYLLIAGTYTPFALVTLHGKWGGLLLSAIWGVALFGIWRELRP
PKPGASAKPSLPLYIGMGWLGVLAAVPLAARLEGAGLAWLLIGGVLYTVGTIFYRNRQGF
RHAHGAWHLFVLAGTTSHYIAVGWFVL
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgggcgaacgactcaacggatacagccacctgctgggcctgctgctggcgctg
tcggccaccgcgctgctgctcgccaagaccgtgcccaccggcgaccccgcgcgcattgcg
ggggcgctggtgttctcgctttcggccgtggcgctgtacgcggcctccacgctcttccac
agcacgcgcggccgcctcaagcgcgtgtgggagcgggcagaccactgcgcgatctacctg
ctgatagccggcacgtacacgcccttcgcgctcgtcacgctgcatggcaaatggggcggg
ctgctgctctcggcgatctggggcgtggcgctgttcggcatctggcgcgagctgcggccg
ccgaagcccggcgcttcggccaagccctcgctgccgctgtacatcggcatggggtggctc
ggcgtgctggccgccgtgccgctggccgcgcggctcgaaggtgccgggctggcctggctg
ctgatcggcggcgtgctctacaccgtgggcaccatcttctaccgcaaccggcagggcttc
cggcacgcgcacggcgcctggcacctgttcgtgctggcgggcacgaccagccactacatc
gcggtcggctggttcgtgctgtag
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