Variovorax sp. PMC12: C4F17_08315
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Entry
C4F17_08315 CDS
T05380
Name
(GenBank) methyltransferase
KO
K10218
4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:
4.1.3.17
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00362
Benzoate degradation
vam00660
C5-Branched dibasic acid metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
C4F17_08315
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C4F17_08315
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.17 4-hydroxy-4-methyl-2-oxoglutarate aldolase
C4F17_08315
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Motif
Pfam:
RraA-like
Motif
Other DBs
NCBI-ProteinID:
AVQ80950
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All DBs
Position
1:complement(1782403..1783089)
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AA seq
228 aa
AA seq
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MSNVPDIIRDFDRVPANVVKEASTFQPAILADVAGRRGAMHGRIKALRPNMKVAGTAFTV
EVRPGDNLMIHAAMAMAKPGDVLVIDGKGDQTAALMGTIMMTACKKLGIAGVVIDGAARD
SLEIEEMGFPVFSVGTNPNGPTKMVPGRIGHPVSVGGVTVNPGDFVIGDADGVVVVEREK
IEGLLPSAAKKVKDEAARIEAIKGGDTNAKWLVSALRAAGVLKEGEVL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtacccgacatcatccgtgacttcgaccgcgtgcccgcgaacgtcgtgaag
gaggcatcgacctttcagcccgccatcctggcggacgtggccggacggcgcggcgcgatg
catggacgcatcaaagccttgcgtccgaacatgaaggttgctggcaccgccttcacggtg
gaggttcgtcccggcgacaacctcatgattcatgcagccatggccatggcaaagccgggt
gacgtgctcgtcattgacggcaagggggaccagacggcggcgctgatgggaaccatcatg
atgaccgcctgcaagaagctcggcattgccggcgtggtcatcgatggcgccgcccgcgac
agcctggagatcgaggagatgggcttccccgtcttctccgtgggaaccaaccccaacggt
ccgaccaagatggtgcccggccgtatcggccaccccgtgtcggtcggcggcgtcacggtg
aaccccggagacttcgtcatcggtgacgccgatggggtagtggtcgtggagcgcgagaag
atcgaagggctgctgcccagcgcggccaagaaagtcaaggacgaagcggctcgcatcgag
gccatcaagggcggcgacacgaatgccaagtggttggtgtccgcactgcgcgccgcgggt
gtgctcaaggaaggggaagtgctgtga
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