Variovorax sp. PMC12: C4F17_08475
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Entry
C4F17_08475 CDS
T05380
Name
(GenBank) phenylalanine--tRNA ligase subunit alpha
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_08475
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
vam01007
]
C4F17_08475
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_08475
Enzymes [BR:
vam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
C4F17_08475
Amino acid related enzymes [BR:
vam01007
]
Aminoacyl-tRNA synthetase
Class II (U)
C4F17_08475
Transfer RNA biogenesis [BR:
vam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C4F17_08475
Prokaryotic type
C4F17_08475
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2d
Phe_tRNA-synt_N
tRNA_synthFbeta
CHDCT2
Motif
Other DBs
NCBI-ProteinID:
AVQ80978
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Position
1:complement(1814133..1815209)
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AA seq
358 aa
AA seq
DB search
MNELDSLVDTARAAFAEAKTPAELENAKAQFLGKSGRITELMKGMAALSVEEKKSRGAAI
NVAKQAIEAALTDRRQQLADEELSLQLRAEALDVSLPGRRRIPGGLHPVSRTLERIEEIF
SSMGFDVADGPEIESDWHSFTSLNNPPNHPARSMQDTFYVDINGDDGIPYNLRPHTSPMQ
VRYAHQHIKKYAAEFAAAAADTTGTVKAPEIRVIAPGRTYRVDSDATHSPMFHQCEGLWL
GENVSFKDLKVVFTDFCRTFFERDDLVLRFRPSFFPFTEPSAEIDIQFASGPLAGRWLEV
SGSGQVHPNVVRNMGLDPECYIGFAFGMGPDRLTMLRYGVNDLRLFFDGDLRFLSQFQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttggactcccttgtcgacaccgcacgcgccgccttcgccgaagcgaaaacg
cccgcagagctcgaaaacgccaaggcccagttcctcggcaagtcgggccgcatcaccgag
ctgatgaagggcatggccgcgctgagcgtcgaagagaagaagtcccgcggcgcggcgatc
aacgtggccaagcaggccatcgaggccgcgctgaccgatcgccgccagcaactggccgac
gaagaactctccttgcaactgcgcgccgaagccctcgacgtgagcctgcccggccgccgc
cgcatcccgggcggcctgcatcccgtgagccgcaccctggagcgcatcgaggaaatcttc
tcgagcatgggcttcgacgtggccgacggccccgagatcgaaagcgactggcacagcttc
acctcgctcaacaacccgccgaaccatcccgcgcgttcgatgcaggacaccttctacgtc
gacatcaacggcgacgacggcattccctacaacctgcgtccgcacaccagcccgatgcag
gtgcgctatgcgcatcagcacatcaagaagtacgccgccgagttcgccgccgcggcggcc
gacaccactggcaccgtgaaggcgcccgagatccgcgtgatcgcgccgggccgcacttat
cgcgtcgacagcgacgccacccactcgcccatgttccaccagtgcgaaggcctgtggctc
ggcgagaacgtgagcttcaaggacctcaaggtcgtcttcaccgacttctgccgcaccttc
ttcgagcgcgacgacctcgtgctgcgtttccgcccgagcttcttcccgttcaccgagccg
agcgccgagatcgacatccagttcgccagcggcccgctggccggtcgctggctcgaggtg
tcgggttcgggccaggtgcatccgaacgtggtgcgcaacatgggcctcgaccccgagtgc
tacatcggcttcgccttcggcatgggccctgaccggctcacgatgctgcgctacggcgtg
aacgacctgcgcctgttcttcgacggcgacctgcgttttctctcgcagttccagtaa
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