Variovorax sp. PMC12: C4F17_08500
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Entry
C4F17_08500 CDS
T05380
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00630
Glyoxylate and dicarboxylate metabolism
vam00640
Propanoate metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
Module
vam_M00012
Glyoxylate cycle
vam_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
C4F17_08500
00640 Propanoate metabolism
C4F17_08500
Enzymes [BR:
vam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
C4F17_08500
4.1.3.30 methylisocitrate lyase
C4F17_08500
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Motif
Pfam:
ICL
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
AVQ80983
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Position
1:complement(1818996..1820327)
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AA seq
443 aa
AA seq
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MPQTLTEQLSREQQIAALEKEWATDPRWKGVKRGYSAADVVRLRGSFPIEHTLAKRGAEK
LWDKINGGAKKGYVNAFGAISAGQAMQQAKAGLEAVYLSGWQVAADGNTSETMYPDQSLY
AYDSVPTMVRRINNTFRRADEIQWGRGINPGDKEFIDYFLPIVADAEAGFGGVLNAFELM
KNMIASGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEACEKLISARFAADVMGVPTIVLAR
TDAEAANLITSDHDANDKPFLTGERTQEGFYRVKNGLEQAISRGVAYAPYADLVWCETGV
PDIGFAREFAQAVHAACPGKLLSYNCSPSFNWKKNLDDKQIASFQEDLSELGYKYQFITL
AGIHVNWFNTFQFAHAYARGEGMKHYVNMVQEPEFAARDKGYTFVSHQQEVGAGYFDDVT
TVIQGGSSSVKALSGSTEEEQFH
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccctcacagaacaactcagccgcgaacagcaaatcgccgccctcgaaaaa
gagtgggccaccgacccccgctggaagggcgtcaagcgcggctacagcgcggccgacgtg
gtgcgtctgcgcggctcgttccccatcgagcacacgctggccaagcgcggcgcggagaag
ctctgggacaagatcaacggcggcgccaagaagggctatgtgaacgccttcggcgccatc
tccgcaggccaggcaatgcagcaggccaaggccggcctggaagccgtgtacctgtcgggc
tggcaagtcgctgccgacggcaacacgtcggaaacgatgtatcccgaccagtcgctctat
gcctacgactcggtgccgacgatggtccgtcgcatcaacaacaccttccgccgtgccgat
gaaatccagtggggccgcggcatcaacccgggcgacaaggaattcatcgactacttcctg
ccgatcgtggccgatgccgaagccggcttcggcggcgtgctgaacgccttcgagctgatg
aagaacatgatcgcctccggcgctgccggcgttcacttcgaagaccaactggccgcagtg
aagaaatgcggccacatgggcggcaaggtgctcgtgccgacgcaggaagcctgcgagaag
ctgatctcggcccgcttcgccgccgacgtgatgggcgtgcccaccatcgtgctggcccgt
accgacgccgaagccgctaacctgatcacgtccgaccacgacgccaacgacaagcccttc
ctgacgggcgaacgcacgcaggaaggcttctaccgcgtcaagaacggcctggagcaagcc
atcagccgcggcgtggcttacgccccctatgccgatctggtgtggtgcgaaaccggcgtg
cccgacatcggcttcgcccgtgagttcgcgcaggccgtgcacgctgcctgcccgggcaag
ctgctgtcgtataactgctcgccttcgttcaactggaagaagaacctcgacgacaagcag
atcgcgtcgttccaggaagacctgtcggagctgggctacaagtaccagttcatcacgctg
gccggcatccacgtcaactggttcaacaccttccagttcgcccacgcatacgctcgcggc
gaaggcatgaagcactacgtcaacatggtgcaggagcccgaattcgcggcgcgcgacaag
ggctacaccttcgtgtcgcaccagcaggaagtgggcgcgggctacttcgacgacgtgacc
accgtcatccagggcggttcgtccagcgtgaaggcgctgtcgggttcgaccgaagaagaa
cagttccactga
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