Variovorax sp. PMC12: C4F17_08625
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Entry
C4F17_08625 CDS
T05380
Name
(GenBank) N-acetylmuramoyl-L-alanine amidase
KO
K01448
N-acetylmuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
C4F17_08625
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
C4F17_08625
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_08625
Enzymes [BR:
vam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
C4F17_08625
Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
Peptidoglycan biosynthesis and degradation
Amidase
C4F17_08625
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C4F17_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_3
AMIN
Motif
Other DBs
NCBI-ProteinID:
AVQ81004
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All DBs
Position
1:1844419..1845909
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AA seq
496 aa
AA seq
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MKAVGLKRRVLLQGGSIALMLGVHQIARGATILAVRVWPAADYTRVTIESDARLNSQQLV
VGSPPRLAVDIEGIDLNPELRELVGKIKPGDPYINGLRVGQNAPKVVRIVFDLKQAVVPQ
VFSLAPVAAYKHRLVLDLYPEQAVDPMEALIAERLRDAPRAPQGSNPPVAGIVPSNPTAP
AGDPLGDLMAQQAMRPGPQTPPPAVVAGNDRPQAPVISAPPPPVVGTAPVRPLAPPASPP
PVAAPRGGTATASRTDRIIIVALDPGHGGEDPGAIGPSGTREKDIVLQVAHRLRERINAG
SVNGSPMRAFLTRDADFFVPLGVRVQKARRVQADLFVSIHADAFTTPAARGASVFALSQS
GASSSAARWMANKENEADKVGGVNVGGHEAQVQRALLDMSTTAQINDSLKLGGAMLGEIK
NIGARLHKGQVEQAGFAVLKAPDIPSVLVETAFISNPEEEANLRRVDYQESLADALMRGI
QRYFAQNPPLARSRQL
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggtcggcctgaaacggcgcgtgcttctgcagggcggcagcatcgcgctgatg
ctcggcgtgcaccagatcgcgcgcggcgcgaccatcctcgcggtgcgcgtatggcccgcc
gccgactacacccgcgtgaccatcgagtccgacgcgcgcctcaattcgcaacagctcgtg
gtgggcagcccgccgcggctcgcggtcgacatcgagggcatcgacctcaaccccgaactg
cgcgagctggtcggcaagatcaagccgggcgacccgtacatcaacggcctgcgtgtcggg
cagaacgcgccgaaggtggtgcgcatcgtgttcgacctgaagcaggccgtggtgccgcag
gtgttctcgctcgctccagtggccgcgtacaagcaccgccttgtgctcgacctgtacccc
gagcaggccgtcgacccgatggaagcgctgatcgcggagcgcctgcgcgacgcgccccgc
gcaccacagggcagcaacccgcccgtggccggcatcgtgccctcgaacccgaccgcgccg
gcgggcgacccgctcggcgacctgatggcgcagcaggccatgcgccccggcccgcagacg
ccgccgccagccgtggtggcgggcaacgatcgcccgcaggcgccggtgatctccgcgccg
ccgccacctgtggtgggcaccgcgcccgtcaggccgttggcgccacccgcatcgccaccg
ccggtggccgcgccccgcggcggcaccgccacggcgagccgcaccgaccgcatcatcatc
gtggcgctcgatcccggccacggcggcgaagaccccggcgccatcggccccagcggcacg
cgcgaaaaagacatcgtgctgcaggttgcgcaccgcctgcgcgaacgcatcaacgcgggc
agcgtgaacggcagcccgatgcgcgcgtttctcacgcgcgacgccgacttcttcgtgccg
ctgggcgtgcgcgtgcagaaggcccggcgcgtgcaggccgacctgttcgtgagcatccat
gccgacgccttcaccacgcccgccgcgcgcggtgccagcgtgttcgcgctgagccagagc
ggtgcgtcgagcagcgccgcgcgctggatggccaacaaggaaaacgaagcagacaaggtc
ggcggcgtcaacgtgggcggccatgaggcgcaggtgcagcgcgccctgctcgacatgagc
acgaccgcgcagatcaacgacagcctcaagctcggcggcgccatgctcggcgagatcaag
aacatcggcgcgcggctgcacaaggggcaggtcgagcaggccggcttcgcggtgctgaag
gcgccagacattcccagcgtgctggtcgaaaccgccttcatcagcaacccggaagaagaa
gcgaacctgcgccgcgtcgactaccaggaaagcctggccgatgcgctgatgcgcggcatc
cagcgctactttgcacagaacccgccgcttgcgcgcagccgccagctctga
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