Variovorax sp. PMC12: C4F17_08775
Help
Entry
C4F17_08775 CDS
T05380
Name
(GenBank) EmrA/EmrK family multidrug efflux transporter periplasmic adaptor subunit
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_08775
Transporters [BR:
vam02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C4F17_08775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
OEP
DUF5701
Motif
Other DBs
NCBI-ProteinID:
AVQ81032
LinkDB
All DBs
Position
1:complement(1875472..1876788)
Genome browser
AA seq
438 aa
AA seq
DB search
MSDNNTPTPAAAAAPAAAEAPASNGKRRRALTALAAVVIVAGGGWGLYEWLVASHYEDTD
NAYVSGNVIQITPQIGGTVMAINADDTDFVKAGQPLVQLDPADAKVALEQAEAALAQAVR
QVRTLYANNGSLAAQVTLRQSDIVKAQSDVAKAQDDLQRRRALSGNGAVSKEELNHAETQ
LDTARSQLAAAQAGVVAAKEALVSNQSLTEGTSVAQHPSVLAAAAKVREAYLATQRVAMP
APVDGYVAKRTVQLGQRVAAGTPMMSIVPLNQLWVDANFKEVQLRNIRIDQPVKLTADVY
GKKVEYTGKVAGLGVGTGSAFALLPAQNATGNWIKVVQRVPVRIALDPEQLKANPLRIGL
SMDAEIDISSKSGKMLADAPRPAALVQTQVYSQLDRGADAEVDRIVSANLGRGAPATAAS
PAKAAPAGASVAVQGQPG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacaacactccgacgcccgctgcagccgcagctcccgccgctgcggaggcg
cccgccagcaacggcaagcgccgccgcgcactcaccgcgcttgccgcggtggtcatcgtc
gccggcggcggctggggcctctacgaatggctggtcgccagccactacgaggacaccgac
aacgcctacgtgtcgggcaacgtgatccagatcaccccgcagatcggcggcaccgtcatg
gccatcaacgccgacgacaccgacttcgtgaaggccggccagccgctggtgcagctcgac
ccggccgacgccaaggtggcgctcgagcaggccgaggccgcgctcgcgcaggccgtgcgc
caggtgcgcacgctgtacgccaacaacggctcgctggccgcgcaggtcacgctgcgccag
tccgacatcgtgaaggcgcagagcgacgtcgccaaggcgcaggacgacctgcagcgccgc
cgcgcgctgtcgggcaacggcgccgtgtcgaaggaagaactcaaccacgccgagacgcag
ctcgacaccgccaggagccagctcgcggcggcgcaggccggcgtggtcgccgccaaggaa
gcgctggtcagcaaccagtcgctgaccgaaggcaccagcgtggcccagcaccccagcgtg
ctggccgccgccgccaaggtgcgcgaggcctacctcgccacgcagcgcgtggccatgccc
gcgccggtcgacggctacgtcgccaagcgcaccgtgcagctcggccagcgcgtggccgca
ggcacgccgatgatgtcgatcgtgccgctcaaccagctgtgggtcgacgccaacttcaag
gaagtgcagctgcgcaacatccgcatcgaccagcccgtgaagctcaccgccgacgtctac
ggcaagaaggtcgagtacaccggcaaggtggccggcctgggcgtgggcaccggcagcgcc
tttgcgctgctgcccgcgcagaacgccaccggcaactggatcaaggtggtgcagcgcgtg
cccgtgcgcatcgcgctcgacccggaacagctgaaggccaacccgctgcgcatcggcctg
tcgatggatgccgagatcgacatctcgtccaagagcggcaagatgctggccgacgcgccg
cgccctgccgcgctggtgcagacgcaggtctacagccagctcgaccgcggcgccgacgcc
gaagtggaccgcatcgtctcggccaacctcggccgcggcgcgcccgccacggccgcgtca
ccggccaaggccgcgcccgccggtgcatcggtggccgtgcaaggccagccgggctga
DBGET
integrated database retrieval system
