Variovorax sp. PMC12: C4F17_08915
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Entry
C4F17_08915 CDS
T05380
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_08915
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_08915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_08915
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_08915
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
TetR_C_30
Gcn1_N
Motif
Other DBs
NCBI-ProteinID:
AVQ81057
LinkDB
All DBs
Position
1:complement(1903377..1904657)
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AA seq
426 aa
AA seq
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MNPPFNLRRETLKFAALALCARPFAALAQASPAPIRLALIESMSGPFANTGEAVFRNLLW
AVERVNARGGIRLPGGARMLQLDRYDSKGQNEEALSALRAAMDDGARIVLQGNSSATAAA
LVDAIDKNNERDPSRRVIFLNYAAVDPVLTNERCSFWHFRFDAHADMRVAALMDVVKDDA
ALKRAYLIGQDYSFGQSVLREARRQLGAQRPDVEIVGDELHPMGKVKDFAPYATKIIASG
AQAVVTGNWGNDLTLLVKAAREAGFNGTFYTFYGNALGAPAAIGDAGIGRVVAVADWLPN
VQTAQSAEFYRAFRARFPKPAEDYVHMRLALMIEALVQAVERAGSVDAVPVARALEQADV
SLHGQRGRMRAADHQFQQQLVVGVMDRQGRPGVQFDVEGSGYGFRVVKTIPAERAELPTS
CKMKRP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccccctttaatttgcgtcgcgagaccttgaaattcgcggcgctggcgctatgc
gcgaggcccttcgcggcgctcgcccaggcttcgcccgcacccatccgcctcgcgctgata
gagagcatgagcggccctttcgccaacaccggcgaggccgtgttccgcaacctgctgtgg
gccgtggagcgcgtgaacgcgcgcggcggcatcaggctgcctggcggcgcgcgcatgctg
cagctcgaccgctacgacagcaaggggcagaacgaagaagcgctctccgcgttgcgcgca
gcaatggacgacggcgcgcgcatcgtgctgcagggcaactcgtcggccacggccgcagcg
ctggtcgatgccatcgacaagaacaacgagcgcgacccgtcgcgccgcgtgatcttcctg
aactacgcggctgtcgatccggtgctcaccaacgagcgttgcagcttctggcacttccgc
ttcgacgcccatgccgacatgcgcgtggcggcgctgatggacgtggtgaaggacgacgcc
gcgctcaagcgcgcctacctcatcggccaggactacagcttcggccagtcggtgctgcgc
gaagcgcgccggcagctcggcgcgcagcggcccgacgtggagatcgttggtgacgaactg
cacccgatgggcaaggtgaaagacttcgcgccgtacgcgacgaagatcattgcgagcggc
gcgcaggccgtggtcacgggcaactggggcaacgacctcacgctgctggtgaaggcggcg
cgcgaggccgggttcaacggcaccttctataccttctacggcaatgcgctgggcgcgccc
gcggccatcggcgacgcgggcatcggccgcgtggtcgcggtggccgactggctgcccaac
gtgcagacggcgcagtccgcggagttctatcgtgccttccgcgcgcgctttccgaaaccg
gccgaagactatgtgcacatgcgcctggcgctgatgatcgaagcgcttgtgcaggccgtc
gaacgcgcgggcagcgtggacgcggtgccggtcgcacgcgcgctggagcaggccgacgtg
agcctccatggccagcgcgggcgcatgcgtgccgcggaccaccagttccagcagcagctg
gtggttggcgtgatggaccggcagggcaggccgggcgtgcagttcgacgtcgagggttcg
ggctacggcttccgcgtggtcaagaccattcccgccgaacgcgcggagctgccgacctcg
tgcaagatgaagagaccttga
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