Variovorax sp. PMC12: C4F17_08945
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Entry
C4F17_08945 CDS
T05380
Symbol
ntrB
Name
(GenBank) nitrate ABC transporter, permease protein
KO
K15577
nitrate/nitrite transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam00910
Nitrogen metabolism
vam02010
ABC transporters
Module
vam_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
C4F17_08945 (ntrB)
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_08945 (ntrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_08945 (ntrB)
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Nitrate/nitrite transporter
C4F17_08945 (ntrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AVQ84541
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All DBs
Position
1:1910074..1910997
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AA seq
307 aa
AA seq
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MVSAVFHSPLEATTAQVTQVAPSVAARPAAPKPTPAPAPETRVRAPIDLRAFWMRVLPPL
AGFGLLLLIWEVVAMKSTTGFPTPAATWQQAVTVFSDPFYSKGPNDQGVGWNVLSSLQRV
ALGFGLAALVGIPAGFAIGRFEFLSRMFNPLISLLRPVSPLAWLPIGLLVFKGANPAAIW
TIFICSIWPMVINTAVGVQRVPSDYMNVAKVLNLSEWKILTKILFPAVLPYMLTGVRLAV
GTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVANIIIAIFVIGIVGLVLEFALIKLATAF
TFEEVKS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggtcagcgcagtctttcattcgccgctcgaagcgaccaccgcacaggtgacgcaggtg
gccccttccgtcgccgccaggccggcagcgccaaagccgacacccgctccggcgcccgag
acccgggtgcgcgcgcccatcgacctgcgcgcattctggatgcgcgtgctgccgccgctg
gcgggcttcggcctgctgctgctgatctgggaagtggtggccatgaaaagcaccaccggc
tttcccacgcccgcggccacctggcagcaggccgtgacggtgttcagcgatccgttctac
agcaaggggccgaacgaccagggcgtgggctggaacgtgctgtcgtcgctgcagcgcgtg
gcgctgggcttcgggctggcggcgctggtcggcattccggcgggctttgccatcggccgc
ttcgagttcctctcgcgcatgttcaacccgctgatcagcctgctgcgccccgtgtcgccg
ctggcctggctgcccatcggcctgctggtgttcaagggcgccaacccggccgcgatctgg
accatcttcatctgctcgatctggccgatggtcatcaacaccgccgtgggcgtgcagcgc
gtgcccagcgactacatgaacgtggccaaggtgctgaacctcagcgagtggaagatcctc
accaagatcctgttccccgccgtgctgccctacatgctgaccggcgtgcggctggccgtg
ggcaccgcgtggctggtgatcgtggccgccgagatgctcacgggcggcgtcggcatcggc
ttctgggtgtgggacgagtggaacaacctcaacgtcgccaacatcatcatcgcgatcttc
gtgatcggcatcgtaggcctggtgctggagttcgcgctcatcaagctcgcaacggcattc
acgttcgaagaggtgaagtcatga
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