KEGG   Variovorax sp. PMC12: C4F17_08950
Entry
C4F17_08950       CDS       T05380                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K15578  nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00910  Nitrogen metabolism
vam02010  ABC transporters
Module
vam_M00615  Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    C4F17_08950
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_08950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_08950
Enzymes [BR:vam01000]
 7. Translocases
  7.3  Catalysing the translocation of inorganic anions and their chelates
   7.3.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.3.2.4  ABC-type nitrate transporter
     C4F17_08950
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Nitrate/nitrite transporter
    C4F17_08950
SSDB
Motif
Pfam: ABC_tran AAA_21 RsgA_GTPase AAA_16 ABC_ATPase AAA_29 nSTAND1 AAA_22 AAA_25 MMR_HSR1 AAA_5 Mg_chelatase AAA_23 AAA_15 nSTAND3 Dynamin_N NACHT
Other DBs
NCBI-ProteinID: AVQ81063
LinkDB
Position
1:1911053..1911862
AA seq 269 aa
MIDDSKYIEIHGVEQAFKTPKGRFVALRDVNLNVAKGEFITLIGHSGCGKSTLLNLIAGL
TTPTQGALLCANKEIKGPGPERAVVFQNHSLLPWLTCFENVYLAVERVFAATESKAQLRQ
RTDAALALVGLTPAAQKRPGEISGGMKQRVGIARALSMEPKVLLMDEPFGALDALTRAKL
QDELLAIVQKTHSTVVMVTHDVDEAVLLSDRIVMLSNGPAATIGDVLSVGIPRPRNRVEL
AEDPVYVHARKAVIDFLYTRQAHVEKAAA
NT seq 810 nt   +upstreamnt  +downstreamnt
atgatcgacgacagcaagtacatcgagatccacggcgtcgagcaggcgttcaagacgccc
aagggccgcttcgtcgcgctgcgcgacgtgaacctgaacgtggccaagggcgagttcatc
acgctcatcgggcactcgggctgcggcaagtcgacgctgctgaacctgatcgccgggctc
accacgcccactcagggtgcgctgctgtgcgccaacaaggaaatcaaagggcccggcccc
gagcgcgcggtggtgttccagaaccactcgctgctgccctggctcacctgcttcgagaac
gtgtacctggcggtcgagcgggtgttcgccgccacggaaagcaaggcgcagttgcgccag
cgcaccgacgccgcgctggcgctggtcggcctcacgcccgccgcgcagaagcggcccggc
gagatctccggcggcatgaagcagcgcgtgggcattgcgcgcgcgctgtcgatggagccc
aaggtgctgctgatggacgagcctttcggcgcgctcgacgccctcacccgcgccaagctg
caggacgagctgctcgccatcgtgcagaagacgcacagcaccgtcgtcatggtgacgcac
gacgtggacgaggccgtgctgctgagcgaccgcatcgtgatgctgagcaacggcccggcc
gccaccatcggcgacgtgctttcggtgggcattccgcgcccgcgcaaccgggtcgagctg
gcggaagaccccgtctacgtgcacgcccgcaaggcggtgatcgacttcctctacacgcgc
caggcgcacgtggagaaggccgcggcctga

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