Variovorax sp. PMC12: C4F17_09225 Help Entry C4F17_09225       CDS       T05380                                  Name (GenBank) RNA polymerase subunit sigma   KO K23514   RNA polymerase sigma-19 factor, ECF subfamily Organism vam  Variovorax sp. PMC12 Pathway vam02020   Two-component system Brite KEGG Orthology (KO) [BR:vam00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     C4F17_09225  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vam03021]     C4F17_09225 Transcription machinery [BR:vam03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      C4F17_09225 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_Tnp_ISL3 HTH_Tnp_4 HTH_24 GerE DUF6362 HTH_29 HTH_31 HTH_28 Motif Other DBs NCBI-ProteinID:  AVQ81114 UniProt:  A0A2P1V7H0 LinkDB All DBs Position 1:1982918..1983430 Genome browser AA seq 170 aa AA seqDB search MPSPAATAPIDALYREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRA YLTTLAQRVLYNFWRRRELERAWLDALAAQPQELAPSPETYALVREAVETIDRWLDGLPP KVREAFLLRRLEGLAHADIAARMGISITSVERYVKQAIVHLYTCPVQAEA NT seq 513 nt NT seq  +upstreamnt  +downstreamnt atgccttcccccgctgcgacagccccgatcgatgcgctttaccgggagcaccgcgactgg cttcaaggctggctgcggcgccggctgggcgacggccacacggccgccgacctgacgcaa gacactttcgttcgcgtcatcagcggcggccaggcgcaggcgatccaggagccgcgcgcc tacctgacgacgctggcgcagcgggtgctctacaacttctggcgccgccgcgagctggag cgcgcatggctcgacgcacttgcagcgcaaccgcaggaactggcgccctccccggaaacc tacgcgctggtgcgcgaagcggtcgaaaccatcgaccgctggctcgacggcctgccgccc aaggtacgcgaggctttcctgcttcgccggctggagggcctggcgcatgccgacatcgcg gcgcgcatgggcatctcgatcacctcggtcgagcgctatgtgaaacaggccatcgtgcat ctctacacctgcccggtgcaggcggaggcctga

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