KEGG   Variovorax sp. PMC12: C4F17_09380
Entry
C4F17_09380       CDS       T05380                                 
Name
(GenBank) GntR family transcriptional regulator
  KO
K11475  GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vam03000]
    C4F17_09380
Transcription factors [BR:vam03000]
 Prokaryotic type
  Helix-turn-helix
   GntR family
    C4F17_09380
SSDB
Motif
Pfam: GntR FCD HTH_11 PaaX HTH_24 Fe_dep_repress HTH_Crp_2 StiP
Other DBs
NCBI-ProteinID: AVQ81140
LinkDB
Position
1:complement(2018504..2019232)
AA seq 242 aa
MTPPDTSRTRALSVADTLRNRIFDGAIAPGSHLMEITLANELGVSRTPVRGAMARLADEG
LLVYLPNKGFQVRRFNAKDVFDAFSVRANLEGMGCRIVGERGLDGSALEQLVAMLAEQHE
VMRSDGWSDERATRWHDLNLEFHRKLLMLAENRWLSEAVGRAYQLPIIFDSNLRPHNRDA
SLPLYHRAQAERALEEHRQIVESLSRGEAVDAEALMREHITANRDLLVRHLGKQSGRVRA
LA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgacccccccagatacctcccggacacgcgcgttgtccgtggccgatacgctgcgcaat
cgcatcttcgacggtgcgatcgcacccggttcccacctgatggagatcaccctcgccaac
gagctgggcgtgtcgcgcacgcctgtgcgcggcgcgatggcgcggctggccgacgaggga
ttgctggtctatctgccgaacaagggtttccaggtgcgccgcttcaacgccaaggacgtg
ttcgacgccttcagcgtgcgcgccaacctcgaaggcatgggctgccgcatcgtcggcgag
cgcgggctggacggctccgcgctggaacaactggtggccatgctcgcagagcagcacgag
gtgatgcgctccgacggctggagcgacgagcgcgccacgcgctggcacgacctgaacctc
gaattccaccgcaagctgctcatgctggccgagaaccgctggctgagcgaggcggtaggc
cgcgcctaccagttgccgatcatcttcgacagcaatctgcgcccacacaaccgcgacgcg
tcgttgccgctctaccaccgcgcgcaggccgagcgcgcgctggaagaacaccgccagatc
gtcgagtcgctcagccgcggtgaagccgtcgacgccgaggcgctcatgcgcgagcacatc
accgccaaccgcgacctcctggtgcgccacctcggcaagcagagcggccgggtgcgcgcg
ctggcctga

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