Variovorax sp. PMC12: C4F17_09455
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Entry
C4F17_09455 CDS
T05380
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vam03009
]
C4F17_09455
Enzymes [BR:
vam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
C4F17_09455
Ribosome biogenesis [BR:
vam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C4F17_09455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AVQ81154
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All DBs
Position
1:2036683..2037234
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AA seq
183 aa
AA seq
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MNLPSPSSRLIRFNKPYGVLSQFTPEGRWRGLKDFIDIPGVYVAGRLDADSEGLLLLTDD
GKLQARIADPRFKMEKIYWVQVEGTPTEEALAALCNGVQLNDGPTRPARARLLDPPPQVW
ERQPPIRERKSIPTAWLELAIREGRNRQVRRMTAAVGLPTLRLIRAAIGPHTLEGLAPGS
WLG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttccgagcccttcttcccgcctgatccgcttcaacaagccctatggcgtcctc
agccagttcacgcccgagggccgctggcgcggcttgaaagatttcatcgacatacccggc
gtctacgtggccggccggctcgacgccgacagcgaaggcctgctgctgctcaccgacgac
ggcaagctgcaggcgcgcatcgccgatccgcgcttcaagatggaaaagatctactgggtg
caggtggaaggcacgccgaccgaagaggcgcttgctgcgctgtgcaacggcgttcaactc
aacgacggccccacgcgccccgccagggcgcgcctgctcgacccgccgccccaggtttgg
gaacgccagccccccatcagggaacgcaagagcatccccaccgcgtggctggaactagcg
atacgcgaaggccgcaaccgccaggtgcggcgcatgacggcggccgtcgggctgccgacg
ctgcggctgatccgcgccgccatcgggccacacacgctcgaagggctggcgccggggagc
tggctcggctga
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