Variovorax sp. PMC12: C4F17_09880
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Entry
C4F17_09880 CDS
T05380
Name
(GenBank) carbohydrate ABC transporter substrate-binding protein
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_09880
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
C4F17_09880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AVQ81228
LinkDB
All DBs
Position
1:complement(2111003..2112385)
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AA seq
460 aa
AA seq
DB search
MKLVKSLIAPTLVALGLIAAGNAAAQEKLTVWWVKGFYKAEDDALFAAIKKFEEKNKNVK
IELSQYPIQDMIPKTVSALDSGSPPDVAYADVYDFQVTGKWAYDGKLEDISSVLTPMKDR
FAPNTLETTYLYNDQTKAKAYYAFPIKQQTMHIEYWRDMLAEAGFKESDIPATWKEYWSF
WCDKVQPASRKESGKRTFGIGQPMGVDSSDAFYSFLTFMDAYNVKLVDDNGKLLVDDPKV
RTGLIGAMTDYTAPYTKGCTPPSSTSWKDPDNNVAFHNKTTVMTHNATISIAAKWLDDST
NASLTPEQREEARKNYTERIRTAGFPSKPDGSKMVYRTAVKTGVVFKDAKNKARAKEFVA
FLMQEDNLTPYVEGSLGRWFPVTKAAQQRDFWKADPHRLSVYNQYAAGTVTFEFTKNYKF
TVLNNENVWAKAMSRVVTDKVPVDKAVDEMIARIKTVAGQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgtcaaatcgctgatcgcgccgacgctcgtcgcgttgggcctcatagcggcg
ggcaatgccgctgcccaggaaaaactcaccgtctggtgggtcaagggcttctacaaggcg
gaggacgacgcactgttcgccgccatcaagaagttcgaggagaagaacaagaacgtcaag
atcgagctgtcgcagtatccgatccaggacatgatccccaagaccgtgtccgcgctcgac
tcgggcagcccacccgacgtggcctacgccgacgtgtacgacttccaggtcaccggcaag
tgggcctacgacggcaagctcgaggacatcagcagcgtgctcacgcccatgaaggaccgc
ttcgcgcccaacacgctggaaaccacgtacctctacaacgaccagaccaaggccaaggcg
tactacgcgttcccgatcaagcagcagacgatgcacatcgagtactggcgcgacatgctg
gcagaggccggcttcaaggagtcggacatcccggccacctggaaggagtactggtcgttc
tggtgcgacaaggtgcagcccgccagccgcaaggaaagcggcaagcgcaccttcggcatc
ggccagcccatgggcgtggattcgagcgacgccttctattcgttcctgaccttcatggac
gcctacaacgtcaagctggtcgatgacaacggcaagctgctggtcgacgatccgaaggtg
cgcaccggcctgatcggcgccatgaccgactacaccgcgccctacaccaagggctgcacg
ccgccttcttccaccagctggaaggacccggacaacaacgtcgcgttccacaacaagacg
accgtgatgacgcacaacgcgaccatctccattgcagccaagtggctcgacgactcgacc
aacgcctcgctcacgccggagcagcgcgaggaagcgcgcaagaactacaccgagcgcatc
cgcacggccggcttcccgagcaagcccgacggcagcaagatggtctaccgcaccgcggtg
aagaccggcgtggtgttcaaggacgcgaagaacaaggcgcgcgccaaggagttcgtcgcc
ttcctgatgcaggaggacaacctcacgccgtacgtcgagggctcgctgggccgctggttc
cccgtgaccaaggccgcgcagcagcgtgatttctggaaggccgacccgcatcgcctctcg
gtctacaaccagtacgccgccggcaccgtgaccttcgaattcaccaagaactacaagttc
accgtgctgaacaacgagaacgtctgggccaaggccatgagccgcgtcgtgaccgacaag
gtgccggtggacaaggccgtggacgagatgatcgcccgcatcaagacggtggcgggtcag
tag
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