Variovorax sp. PMC12: C4F17_09885
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Entry
C4F17_09885 CDS
T05380
Name
(GenBank) FadR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
MarR_2
HTH_24
HTH_Crp_2
TrmB
FadR_C
Motif
Other DBs
NCBI-ProteinID:
AVQ81229
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Position
1:complement(2112492..2113235)
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AA seq
247 aa
AA seq
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MIKNIHGRTLELLGEAVVSGRYAIGASIPAEPVLGEELGVSRTVVREAIKSLAAKGLIVT
GPKVGTRVLPKDKWNWFDPDVITWQARAGLTPEFLRDLQDLRRVVEPAAVRLAAERASAK
DIEEIEAAYAGMKEAVENGGEYVAFDLRFHNGLLSAAGNRMLSQMSKVLNALLRTSFEIS
TTKPDGPALSLPLHRAVLDAVIAHDPAKAELAIIRLIDGARQDIEDVLGSRRRLPRLSRP
PPRLKAS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaacatccacggtcgaacgctcgagctgctcggtgaagccgtggtgtcgggg
cgttacgccatcggtgcgtcgatccccgcggagcccgtgctgggcgaggaactcggtgtg
agccgcaccgtggtgcgcgaggccatcaagtcgctggcggccaagggcttgatcgtcacc
ggcccgaaggtcggcacgcgcgtgctgcccaaggacaagtggaactggttcgaccccgac
gtcatcacctggcaggcgcgcgccggcctcacgcccgagttcctgcgcgacctgcaggac
ctgcgccgcgtggtcgagcccgcggccgtgcggcttgccgccgaacgtgcgagcgcgaag
gacatcgaggagatcgaggccgcctacgcgggcatgaaagaggccgtggagaacggcggc
gagtacgtcgccttcgacctgcgctttcacaacgggctgctttccgccgccggcaaccgc
atgctctcgcagatgagcaaggtgctcaacgcgctgcttcgcaccagcttcgagatatcg
accaccaagcccgacggtcccgcgctgtcgctgcccctgcaccgcgcggtgctagacgcc
gtcatcgcgcacgaccccgcgaaggccgagctggccatcatccgcctcatcgacggcgcg
cggcaggacatcgaggacgtgctcggctcgcgccgcaggctgccgcgcctgagccggccg
ccgcccaggctcaaggccagctag
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