Variovorax sp. PMC12: C4F17_09920
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Entry
C4F17_09920 CDS
T05380
Name
(GenBank) MATE family efflux transporter
KO
K26937
MATE family, multidrug efflux pump
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_09920
Transporters [BR:
vam02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
C4F17_09920
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-ProteinID:
AVQ81236
LinkDB
All DBs
Position
1:complement(2118911..2120332)
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AA seq
473 aa
AA seq
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MTAPGNTAELDPRTRRLLEAPIVPTLLRLAAPNVLVMVAQASVGLIETYFVGKLGTDALA
GMALVFPIVMLMQMTSSGAMGGGIASSIARALGARRRADADALVWHAIVIALGFGLCFTL
ALILGGRWLYGVMGGTGPALEAALTYSHWVFSGAVLVWLFNSLSAIIRGTGNMSVPANVT
VVGVVFLIPASPLLIFGIGPLPGMGIAGGAMALLLYYLLGSIALIVYLRSPRSLLRPTLA
ALKLRWPLFRDILRIGLVGAVSTVATNLSIGIATALTGHFGSGALAGYGTASRLEYLLVP
LVFGLGAPLVAMVGTCMGAGQRERALRATWAGAALAFALTETIGLAAALFPRPWLLLFGN
DPAMLETGAHYLRVVGPLYGFFGVGLVLYFASQGAGRLLWPVLGNIARLAVAGTGGWLAL
RWGGGLTGVFAAQGVALVVYGIVIASAIAGGAWFGRVGWPRTTSGLLRRVAQA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctcccggcaacaccgccgaactcgacccgcgcacccgccgcctgctggaggcg
cccatcgttcccacactgctgcgactggcagcgcccaacgtgctggtgatggtggcgcag
gcctccgtcggcctgatcgaaacctacttcgtcggcaagctcggcaccgacgcgctcgcg
ggcatggcgctcgtgttccccatcgtcatgctgatgcagatgacctccagcggcgcgatg
ggcggcggcatcgcctcgtccatcgcccgtgcgctcggcgcgcgccgccgcgccgacgcc
gatgcgctggtgtggcacgccatcgtcatcgcgctgggcttcggcctgtgcttcacgctc
gcgctgatactgggcgggcgctggctctacggggtcatgggcggcacggggccggcgctc
gaagccgcgctcacttactcgcactgggtgttctcgggcgcggtgctggtgtggctgttc
aactcgctgtcggccatcatccgcggcaccggcaacatgtcggtgccggccaacgtgacg
gtggtgggcgtggtcttcctgattccggcgtcgccgctgctgatcttcggcatcggcccg
ctgcccggcatgggcatcgccggcggcgcgatggcgctgctgctgtactacctgctgggc
tccatcgcgctcatcgtctacctgcgttcgccgcgcagcctgctgcggcccacgctggcc
gcgctcaagctgcgctggccgctgttccgcgacatcctgcgcatcgggctggtgggtgcg
gtgtccaccgtggccaccaatctttccatcggcatcgcgaccgcgctcaccgggcatttc
ggctcgggcgcgctggccggctacggcacggcctcgcggctcgagtacctgctggtgccg
ctggtgttcggcctcggcgcaccgctggtcgcgatggtcggcacctgcatgggggcgggc
cagcgcgaacgcgcgttgcgcgccacctgggccggcgcggcgctggcctttgcgttgacc
gagaccatcggcctcgcggcggcgctgttcccgcgcccgtggctgctgctgttcggcaat
gaccctgcaatgctcgagaccggcgcgcactacctgcgcgtggtggggccgctctacggc
ttcttcggcgtcggcctggtgctgtatttcgcatcgcagggcgccggccggctgctgtgg
ccggtgctcggcaacatcgcgcggctcgcggtggcaggcacgggcgggtggctggcgctg
cgctggggcggcgggctcacgggcgtgttcgcggcgcaaggcgttgcgctggtggtctac
ggcatcgtgatcgcgtcggccatcgcgggcggtgcgtggttcggccgggtgggctggccg
cgcaccaccagcggcttgctgcgccgcgtggcgcaggcttga
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