Variovorax sp. PMC12: C4F17_09940
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Entry
C4F17_09940 CDS
T05380
Name
(GenBank) iron ABC transporter substrate-binding protein
KO
K02012
iron(III) transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_09940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_09940
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Iron(III) transporter
C4F17_09940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
SBP_bac_8
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AVQ81240
LinkDB
All DBs
Position
1:2123020..2124084
Genome browser
AA seq
354 aa
AA seq
DB search
MFTERKSVRGRAARALFSASAAWLAVAALPAQAATDELTLYTTREPALIQPLISAFSAQS
NIKVNTVFVKDGLLERVKAEGARSPADVLMTVDIGNLMDLVDGGVTQPVKSAALESAIPA
NLRGADGQWFSLSMRARVLYADKSLPIKSFRYEDLADPKYKGKVCIRAGQHPYNTALVAS
LIAHDGEAKAEQWLRGVKANLARKATGGDRDVARDILGGICDVGLANSYYVGQMKSAKEG
TDARKWGDAIKVVRPTFANARSGGTHVNISGAAVARNAPQRANAVKLLEFLVSEPAQALY
AQANYEYPVRKGVALDPIIGQTIGELKVDPLPLTEIAKHRKQASALVDKVGFDQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgaacgcaaaagcgtccgaggccgcgccgcgcgcgcactgttcagcgccagc
gccgcctggctggccgttgccgccctgcccgcgcaagccgcgaccgacgaactcacgctc
tacacgacgcgcgagccggcgctgatccagccgctcatctcggccttcagcgcccagagc
aacatcaaggtcaacaccgtgttcgtcaaggacggcctgctggaacgggtgaaggccgaa
ggcgcgcgctcgccggccgacgtgctgatgacggtggacatcggcaacctcatggacctg
gtggacggcggcgtgacgcagccggtgaagtcggccgcgctcgaatcggccattcccgcc
aacctgcgcggcgcggacggccagtggttctcgctctcgatgcgcgcgcgcgtgctgtac
gccgacaagagcctgccgatcaagagcttccgctacgaagacctggccgacccgaagtac
aagggcaaggtctgcatccgcgccggccagcacccgtacaacaccgcgctggtcgcctcg
ctgatcgcgcacgacggcgaagccaaggccgagcagtggctgcgcggcgtcaaggccaac
ctggcgcgcaaggccaccggcggcgaccgcgacgtggcgcgcgacatcctgggcggcatc
tgcgacgtcggcctggccaactcctactacgtcggccagatgaagagcgccaaggaaggc
accgacgcgcgcaagtggggcgacgccatcaaggtggtgcgcccgaccttcgccaacgcc
aggagcggcggcacgcacgtcaacatcagcggcgcggccgtggccaggaatgcgccgcag
cgcgccaacgcggtcaagctgctcgagttcctggtgtcggaaccggcccaggcgctctac
gcgcaggccaactacgaatacccggtgcgcaagggcgtggcgctcgacccgatcatcggc
cagaccatcggcgagctgaaggtcgatccgctgccgctgaccgagatcgccaagcaccgc
aagcaggccagcgcgctggtcgacaaggtcggcttcgaccagtga
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