Variovorax sp. PMC12: C4F17_10015
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Entry
C4F17_10015 CDS
T05380
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_10015
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_10015
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AVQ81255
LinkDB
All DBs
Position
1:complement(2136188..2138281)
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AA seq
697 aa
AA seq
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MIPNFRRNAIGAAVLSLAALAGAANAQTAPAPSTADDASLREVTVTGNPLGASDLIAPTT
SLSGDKLLLRSESTLGETLNNLPGVSSSYFGPNASRPSIRGQDGDRIRILQNGGGAPDAS
ALSYDHAVPVDALVTERIEVLRGPSALQYGGSAVGGVVNVIDNRIPSEPINGFGGRADLG
YATGNKEKSGGVLLEGGNDRIALHVDAFNRDSKDVSVPITLECSKPGSPWMARRICNSAN
QAHGGAFGGTVFFDQGWVGASVSTYRSTYGTVAEDDVTIGMKSDRQALEGEWRPGGFISS
IHAKLSHTNYRHTEFEGREPGTAFSNVSNDLRLEARHRKIGNFEGLVGFSSETNRFAADG
EEAFAPHSRTRSTALFLHEEYGTSWGRLSFGARTERVRVRSLGYPEDPSVTRFAVGERTF
NPHSAAFGALVNLAPQWQLTSNIAYTERAPKDYELLANGPHVATAAWEVGDPTLKKEKST
GFDLGAQWKDGPNTARVNAYVTRFRNYIGLTASGRELDSEGNVAEPGTPDTLAEYLYGGV
RARFTGIEANGNLRLLGADGFARMADAGTLDLEWRGDIVRAKNLDTGEPLPRIAPLRLGA
TLAYGNGPWTARLGFDYNAAQHRVPSVGARETDAYTLWNAAITYRMKVQRANLTWYARVD
NITNKLAYSPTSILTTTVYPNAPLPGRTLKVGLRVTF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgatccccaatttccgtcgcaacgccatcggcgctgccgttctttcgctcgccgcgctg
gcgggtgcggccaacgcgcagaccgcgcctgcgccttccaccgccgatgacgcgagcctg
cgcgaagtgaccgtcaccggcaatccgctcggcgccagcgacctcatcgcgccgacgact
tcgctgtcgggcgacaagctgctgctgcgctccgaatcgaccctcggcgaaacgctgaac
aacctgccgggcgtgagcagcagctacttcggtcccaacgcgagccggcccagcatccgc
gggcaggacggcgaccgcatccgcattttgcagaacggcggcggcgcgcccgacgcctcg
gcgctgagctacgaccacgcggtgccggtcgatgcgctggtcacggagcgcatcgaggtg
ctgcgcggcccttcggcgctgcagtacggcggcagcgccgtcggcggcgtggtcaacgtg
atcgacaaccgcattccgtccgagcccatcaacggtttcggcggccgtgccgacctgggc
tatgccaccggcaacaaggaaaagagcggcggcgtgctgctcgagggcggcaacgaccgc
atcgcgctgcacgtcgatgccttcaaccgcgattcgaaagacgtgtcggtgcccatcacc
ctggagtgcagcaagccgggctcgccgtggatggcgcgcaggatctgcaactccgccaac
caagcgcacggcggcgcgttcggcggcacggtgttcttcgaccagggctgggtcggcgcg
tcggtcagcacctaccgcagcacctacggcaccgtggccgaggacgacgtgaccatcggc
atgaagtccgaccgccaggcgctcgaaggcgaatggcgtccgggcggcttcatcagcagc
atccacgcgaagctgagccacaccaactaccgccacaccgagttcgagggccgcgagccg
ggcaccgcgttctccaacgtgagcaacgacctgcgcctggaggcgcgccaccggaagatc
ggcaacttcgagggcctggtcggcttcagcagcgagaccaaccgattcgccgccgacggc
gaggaagccttcgcgccgcacagccgcacgcgttcgaccgcgctgttcctgcacgaggaa
tatggcacctcgtggggtcgcctgagcttcggcgcgcgcaccgagcgggtccgcgtgcgt
tcgctcggctacccggaagacccgagcgtgacgcgcttcgccgtcggcgagcgcaccttc
aacccgcacagcgccgcgttcggtgccctggtcaacctcgcgccgcagtggcaactgacc
tcgaacatcgcctacaccgagcgcgcgcccaaggactatgagctgctggccaacggcccg
cacgtggccacggctgcatgggaagtgggcgacccgacgctcaagaaggaaaagtcgacc
ggcttcgaccttggcgcgcagtggaaagacggccccaacacggcccgcgtgaacgcctat
gtcacgcgctttcgcaactacatcgggctgaccgcctcgggccgcgagctggactccgaa
ggcaatgtggccgagcccggcacgcccgacacgctcgccgaatacctctacggcggcgtg
cgcgcgcgcttcaccggcatcgaggccaacggcaacctgcgactgctgggcgccgacggc
ttcgcgcgcatggctgatgccggcacgctcgacctggagtggcgcggcgacatcgtgcgc
gcgaagaacctcgacaccggcgagccgctgccgcgcatcgcgccgctgcgcctgggcgcc
acgctggcctacggcaacggcccgtggaccgcgcgactgggcttcgactacaacgccgcg
cagcaccgggtgccgagcgtgggcgcgcgcgagaccgatgcgtacacgctgtggaacgcg
gccatcacgtaccgcatgaaggtgcagcgcgcgaacctcacctggtatgcgcgcgtcgac
aacatcaccaacaagctggcctacagcccgacatcgatcctcacgaccacggtgtacccg
aatgccccgctgccggggcggacgctgaaggtcgggctgcgcgtgacgttctga
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