Variovorax sp. PMC12: C4F17_10095 Help Entry C4F17_10095       CDS       T05380                                  Name (GenBank) AMP-dependent synthetase   KO K01897   long-chain-fatty-acid---CoA ligase [EC:6.2.1.3] Organism vam  Variovorax sp. PMC12 Pathway vam00061   Fatty acid biosynthesis vam00071   Fatty acid degradation vam01100   Metabolic pathways vam01212   Fatty acid metabolism vam02024   Quorum sensing vam04146   Peroxisome Module vam_M00086   beta-Oxidation, acyl-CoA synthesis Brite KEGG Orthology (KO) [BR:vam00001]  09100 Metabolism   09103 Lipid metabolism    00061 Fatty acid biosynthesis     C4F17_10095    00071 Fatty acid degradation     C4F17_10095  09140 Cellular Processes   09141 Transport and catabolism    04146 Peroxisome     C4F17_10095   09145 Cellular community - prokaryotes    02024 Quorum sensing     C4F17_10095  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:vam01004]     C4F17_10095   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vam04147]     C4F17_10095 Enzymes [BR:vam01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.3  long-chain-fatty-acid---CoA ligase      C4F17_10095 Lipid biosynthesis proteins [BR:vam01004]  Acyl-CoA ligase   Long/very long chain acyl-CoA ligase    C4F17_10095 Exosome [BR:vam04147]  Exosomal proteins   Exosomal proteins of breast milk    C4F17_10095   Exosomal proteins of breast cancer cells    C4F17_10095 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C Motif Other DBs NCBI-ProteinID:  AVQ81270 LinkDB All DBs Position 1:2153360..2154991 Genome browser AA seq 543 aa AA seqDB search MPAATTTAVNGLAPSSAPRLHARISRVTLGDVVHRSARRFGERTALIEGEHRLSYRALDA ASNRFAHHLLDLGLAKGARVGMLCNNSTQMVIAMLGIQKAGLVWVPINTALAVDAIGYIL AHAEVRHVVIDNALHAKPELRELLQATGVSPLLCVLDSDTPPPGIPTVQQAVAQGPETLP DVDIDSTDLALIMYTSGTTGRQKGVMHSHASVHSVLLSNMVEWGSSPERADVWSSVLPLF HCGQHTVLMSALSVGGAVVVLRGFDPGAMLAAIERHRITVAVGLPMMYGALLAHPQRASR DLSSLRLCVYAMAPMSRTLLLRLLDEFCPSFALVSGQTEMYPGATIFEASEQRKRFGSYW GVGTLVNEVAVMGDGGELLAPGQVGEIVFRGPNVMLGYYKDPEATANAQRFGWHHSGDLG RMDDDGQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITAF VTRRPDAPADFDEAALTAHCKEHLGGFEVPKQIIFLAALPMTSTGKIQKFELRKAHQDNY TRG NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atgcctgcagccaccaccacggccgtcaacggcctcgcgccctcgtcggccccgcgcctc cacgcgcgcatttcacgcgtaaccctgggcgacgtggtccatcgctccgcgcgccgcttc ggcgagcgcacggcgctgatagagggcgaacatcgcctctcctaccgcgcgctcgacgcg gcttcgaaccgcttcgcgcaccacctgctggacctgggcctcgccaagggagcgcgcgtg ggcatgctgtgcaacaactcgacccagatggtgatcgccatgctgggcatccagaaggcc gggctggtgtgggtgccgatcaacaccgcgctggcggtggacgccatcggctacatcctt gcgcacgccgaagtgcggcacgtggtgatcgacaacgcgctgcacgcgaagccggagctg cgtgaactgctgcaggccacgggcgtgtctcccctgctgtgcgtgctcgacagcgacacg ccaccgccgggcatcccgaccgtgcaacaggccgtcgcgcaagggccagagacgctgccc gacgtggacatcgacagcaccgacctcgcgctcatcatgtacaccagcggcaccaccgga cgccagaagggcgtgatgcattcgcacgcttcggtgcattcggtgctgctcagcaacatg gtcgaatggggcagcagccccgagcgcgccgatgtgtggagcagcgtgctgccgctgttc cattgcgggcagcatacggtgctgatgtcggcgctgtcggtgggtggcgcggtggtcgtg ctgcgcggcttcgaccccggcgccatgctggccgccatcgagcgccacaggatcaccgtg gccgtgggcctgccgatgatgtacggcgcgctgctggcccatccgcagcgcgcctcacgc gacttgtcgagcctgcggctgtgcgtgtatgcgatggcgccgatgtcacgcacgctgctg ctgcgcctgctcgacgagttctgccccagcttcgcgctggtgtcgggccagaccgagatg tatccgggcgccaccatcttcgaggcgagcgagcagcgcaagcgcttcggctcctactgg ggcgtgggcacgctggtgaacgaggtcgcggtgatgggcgacggcggcgaactgctggcc cccgggcaggtcggggagatcgtctttcgcgggcccaacgtgatgctgggctactacaag gacccggaggccaccgccaatgcccagcgcttcggctggcaccactccggcgacctcggc aggatggacgacgacggccagctcatcttcctcgaccgcctgaaggacatggtgaagtcg ggcggcgagaacgtgccctccatcaaggtcgaggaagtgctgctgcgccacccgggcgtg atgaacgccgccgtggtgggcctgccgcacgagcactggggcgaggccatcaccgccttc gtgacgcgccgccccgatgcgcccgcggacttcgacgaagccgcgctcacggcgcactgc aaggagcacctgggcggcttcgaggtgcccaagcagatcatcttcctggcggcattgccg atgacgtccaccggcaagatccagaagttcgagctgcgcaaggcgcaccaggacaactac acgcgcggctga

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