Variovorax sp. PMC12: C4F17_10310
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Entry
C4F17_10310 CDS
T05380
Name
(GenBank) amidase
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00970
Aminoacyl-tRNA biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C4F17_10310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
vam03029
]
C4F17_10310
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
C4F17_10310
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
C4F17_10310
Mitochondrial biogenesis [BR:
vam03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
C4F17_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
AVQ81307
LinkDB
All DBs
Position
1:2226427..2227830
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AA seq
467 aa
AA seq
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MTTKPLYSLGVQELHAAYAAKELSPVEVARSVNERIAAYEPELHATWLFRPELALEQARA
SEARWLAGKPRGMLDGVPVTIKDNLATEGDPMPLGTAAYDLVPMSYDSPPAARLKEDGTV
LVAKTTMPDLGMLSSGLSSFHELSRNPWDVSRTPGGSSSGAGAAAAAGYGPLHVGTDIGG
SLRLPASWCGIYTLKPSFGRIPLSSPYMGRCAGPMTRTVADSALMMASVAQPDDRDYSEL
PPPVIDWNAFEVDPSFLKGKRVALHMDAGCGLPLDPQIAEAVRRAAKRIEAAGAHVEEIP
AFMTPKMLQGMDHFWRMRSCIDIQAMPAEKRAKILPYIREWAESAAGFSGAHIFDAYSQF
IATRAATVAATKAYDFVISPVSPNLPAPADHASPTNDPMLPLEHIGFTVPYNMSEQPAAS
INCGYSAEGMPIGLQIAGRRFDDLGVLQFSRAFEQIREAQKPWPEPK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaagcccctctattcgctgggcgtgcaggagctgcacgcggcctatgccgcc
aaggaactgtcgccggtggaagtggcgcgctcggtgaacgagcgcatcgccgcctacgag
cccgagctgcacgcaacctggctgttccgccctgaactcgcgctcgagcaggcgcgcgcc
tccgaagcccgctggctggccggcaagccgcgcggcatgctcgacggcgtgcccgtgacc
atcaaggacaacctcgccaccgaaggcgacccgatgccgctgggcaccgccgcctacgac
ctggtgccgatgagctacgactcgccgcccgccgcgcgcctgaaggaagacggcacggtg
ctggtggccaagaccaccatgcccgacctgggcatgctgtcgtcgggcctgtcgagcttt
catgaactctcgcgcaacccatgggacgtttcgcgcacgccgggcggttccagctccggc
gccggtgctgctgcggccgcaggctacggcccgctgcacgtgggcacggacatcggcggc
tcgctgcgcctgccggccagctggtgcggcatctacacgctcaagcccagcttcggccgc
attcccctcagttcaccctacatgggccgctgtgccggtccgatgacgcgcacggtggcc
gactcggcgctgatgatggcgtcggtcgcgcagcccgacgatcgcgactactcggagctg
ccgccgccggtcatcgactggaacgccttcgaggtcgatccgtcgttcctcaagggcaag
cgcgtggcgctgcacatggacgcgggctgcggcctgccgctcgatccgcagatcgccgag
gcggtgcgccgcgcggcgaagcgcatcgaggctgccggtgcgcacgtcgaagaaatcccg
gccttcatgacaccgaagatgctgcagggcatggaccacttctggcgcatgcgctcgtgc
atcgacatccaggcgatgccggccgagaagcgcgcgaagatcctgccgtacatccgcgaa
tgggccgagagcgccgccggattctcgggcgcgcacatcttcgacgcctacagccagttc
atcgccacgcgcgcggccacggtcgccgcaaccaaggcctacgacttcgtcatctcgccg
gtgtcgcccaacctgcccgcgccggccgaccacgcctcgccgaccaacgatccgatgctg
ccgctggaacacatcggcttcacggtgccctacaacatgtcggagcagcccgccgcgtcg
atcaactgcggctattcggccgagggcatgcccatcgggctgcagatcgccgggcgccgt
ttcgacgacctgggcgtgctgcagttcagccgcgccttcgagcagatccgcgaagcacag
aaaccctggccggaacccaagtga
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