Variovorax sp. PMC12: C4F17_10340
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Entry
C4F17_10340 CDS
T05380
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_10340
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_10340
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
Motif
Other DBs
NCBI-ProteinID:
AVQ81312
LinkDB
All DBs
Position
1:complement(2232171..2232821)
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AA seq
216 aa
AA seq
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MKKLNKVAMMFAVAALATAAGAQTRVTAADGGPTIDNWQNGTGELVWKNGTNELCWRDAN
WTPATAAAGCDGALVPAAPVATAPTPAAPVPPAPPVVAANKVTFAADAFFDFDKSVLKPE
GRAKLTDLVEKIRGVNLEVIIAVGHTDSIGTVAYNQRLSVRRAEAVKAFLVSKGIERNRV
YTEGKGKSQPVADNKTKEGRAKNRRVEIEVVGTRAN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgaataaagtggcgatgatgtttgcagtcgctgcgctcgccactgccgcc
ggcgcgcagacccgtgtcaccgctgcggacggcggtcctacgatcgacaactggcaaaac
ggcaccggcgaactggtctggaagaacggcacgaacgaactgtgctggcgcgatgccaac
tggacgcccgcaacggctgccgctggttgcgacggtgctctggttcctgctgctcctgtc
gctacggctcctacgcctgctgctccggttcccccggctcccccggtcgtggccgccaac
aaggtgaccttcgctgctgacgccttcttcgacttcgacaagtcggttctgaagcctgaa
ggccgtgcgaagctgaccgacctggtcgagaagatccgtggtgtgaacctcgaagtgatc
atcgctgtgggccacaccgactcgatcggtacggttgcctacaaccagcgtctgtcggtc
cgtcgcgccgaagccgtcaaggccttcctggtctcgaagggcatcgaacgcaaccgcgtc
tacaccgaaggcaagggcaagtcgcagcctgtggctgacaacaagaccaaggaaggtcgc
gccaagaaccgtcgcgtggaaatcgaagtggtcggcacccgcgccaactaa
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