Variovorax sp. PMC12: C4F17_11265
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Entry
C4F17_11265 CDS
T05380
Name
(GenBank) GntR family transcriptional regulator
KO
K03710
GntR family transcriptional regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_11265
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
GntR family
C4F17_11265
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
MarR_2
HTH_11
MarR
Motif
Other DBs
NCBI-ProteinID:
AVQ81483
LinkDB
All DBs
Position
1:2425659..2426417
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AA seq
252 aa
AA seq
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MNTPTTLDEPATPSFSPLYQQIKTLILQSLQAGEWKPGEPIPSEMDLAVRYRVSQGTVRK
AIDELSAENLVVRRQGKGTFVATHAEQHVQYRFLKLVPDAGDPSSEGPAVRTIVDCKRLR
ASADVARALGLRTGDAVLQVRRVLAYAGVPTILEDLWLPGTPFKGLTAERLRAWPGPMYA
LFETEFGVRMVRAEEKIRAVLPDAEQAALLDVTPQMPLLSVERVAHTYHDMPMELRRGLY
RTDTHHYRNQLG
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgcccacaacactcgacgagcccgcgacgccgtccttcagtccgctctaccag
cagatcaagaccctgatcctgcagagcctgcaggcgggcgagtggaagccgggcgagccc
atccccagcgagatggacctggccgtgcgctatcgggtgagccagggcacggtgcgcaag
gccatcgacgagctctcggccgagaacctggtggtgcgccgccagggcaagggcaccttc
gtcgccacgcatgcggagcagcacgtgcagtaccgcttcctcaagctcgtgcccgatgcc
ggcgaccccagcagcgaaggccccgcggtgcgcaccatcgtcgactgcaagcgcctgcgc
gcgtcggccgacgtggcccgcgccctcggcctgcgcaccggagatgccgtgctgcaggtg
cgccgcgtgctggcctacgccggcgtgccgaccatcctcgaagacctctggctgcccggc
acgcccttcaagggcctcacggcagagcggctgcgcgcgtggccggggccgatgtacgcg
ctgttcgaaaccgagttcggcgtgcgcatggtgcgggccgaagaaaaaatccgcgccgtg
ctgcccgatgccgaacaagccgcgctgctcgacgtcacgccgcagatgcccctgctgagc
gtggaacgcgtggcgcacacctaccatgacatgcccatggaattgcgccgcgggctctat
cgcaccgacacgcaccactacaggaaccagctgggctga
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