Variovorax sp. PMC12: C4F17_11345
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Entry
C4F17_11345 CDS
T05380
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00260
Glycine, serine and threonine metabolism
vam00400
Phenylalanine, tyrosine and tryptophan biosynthesis
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01230
Biosynthesis of amino acids
Module
vam_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
C4F17_11345
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
C4F17_11345
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
C4F17_11345
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GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
Motif
Other DBs
NCBI-ProteinID:
AVQ81499
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Position
1:2443250..2444095
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AA seq
281 aa
AA seq
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MSRIAATFAALKKDGRRALVPYVTAGFPFADITPELMHGMVEAGADVIELGVPFSDPMAD
GPVIQKAGEAALALGVGMKQVLAIVATFRQKDATTPVVLMGYANPVERYDLVHGKKAFIR
DAAVAGVDGLLVVDYPPEECEAFAADLKAAGIDLIFLLAPTSTDERMAQVARIASGYVYY
VSLKGVTGAGHLDAEAVGQMIPRIRQHVGIPVGVGFGIRDARTAQAVGSAADAVIIGTKI
IQLIEDQPRDKVVPAVREFLAGIREALDALPAATAKNAAGR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcattgccgcaaccttcgcagcgctgaaaaaagacggccgccgcgcactcgtg
ccgtacgtcacggcgggctttccctttgccgacatcacgcccgagctgatgcacggcatg
gtcgaggccggcgccgacgtgatcgaactcggcgtgcccttctccgacccgatggccgac
ggccccgtgatccagaaggccggcgaggccgcgctggcgctgggcgtcggcatgaagcag
gtgctggccatcgtggctaccttccgccagaaggacgcgaccacgcccgtggtgctgatg
ggctatgcgaacccggtcgagcgctacgacctggtgcacggcaagaaggccttcatccgc
gacgcggccgtggccggcgtggacggcctgctggtcgtcgactacccgcccgaggaatgc
gaagcctttgccgccgacctcaaggccgcaggcatcgacctgatcttcctgctcgccccc
accagcaccgacgagcgcatggcccaggtcgcgcgcatcgccagcgggtacgtctactac
gtgtcgctcaagggcgtgacgggtgccggccacctcgacgccgaagcggtcggccagatg
attccgcgcatccgccagcacgtgggcattccggtcggcgtgggcttcggcatccgcgac
gcccgcaccgcgcaggcggtcggatcggccgccgacgcggtcatcatcggcaccaagatc
attcaactcatcgaagaccagccccgcgacaaggtcgtgccggccgtgcgtgaattcctc
gcgggcatccgcgaggcgctcgacgcgctgcccgccgcgacggccaagaacgcggctggt
cgataa
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