KEGG   Variovorax sp. PMC12: C4F17_11600
Entry
C4F17_11600       CDS       T05380                                 
Name
(GenBank) DNA-binding response regulator
  KO
K08083  two-component system, LytTR family, response regulator AlgR
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_11600
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vam02022]
    C4F17_11600
Two-component system [BR:vam02022]
 LytTR family
  AlgZ-AlgR (alginate production)
   C4F17_11600
SSDB
Motif
Pfam: Response_reg LytTR
Other DBs
NCBI-ProteinID: AVQ81548
UniProt: A0A2P1V8T0
LinkDB
Position
1:complement(2500128..2500883)
AA seq 251 aa
MNTSTLKTLIVDDEALARSRLRTLLRDCSSPGAEVVAEAAQGAEAQQQLATMALDLVLLD
VHMPGIDGIEVARALRSRADAPAVVFVTAHAAHAVTAFDLDAVDYLTKPVRAERLQQALQ
KAERFLKERRALQAEAAPETVLIQDRGRAERVPLSEVLYLKSEYKYLTVRTATRSHILDG
SLNEFEERYPHRFLRVHRNALVARAAIRALEKYDDGEDAEGWALRLDAVPEPVAVSRRQL
AAVREVIKEAR
NT seq 756 nt   +upstreamnt  +downstreamnt
atgaacacgagcacactgaagacactcatcgtcgacgacgaagccctggcccgttcgcgc
ctgcgcaccttgctgcgcgactgcagctcgcccggcgccgaggtggtggccgaagccgcg
cagggcgccgaagcgcagcagcagctggccacgatggcgctcgacctggtgctgctcgac
gtgcacatgcccggcatcgacggcatcgaggtggcgcgcgcgctgcgcagccgggccgac
gcgccggcggtggttttcgtgacggcgcatgcggcccacgcagtgacggccttcgacctc
gacgcggtcgactacctcaccaagcccgtgcgcgccgagcgcctgcagcaggcgctgcag
aaggccgagcgcttcctgaaggagcgccgcgcgctgcaggccgaagccgcgccggaaacc
gtgctgatccaggaccggggccgcgccgagcgcgtgccgctgtccgaagtgctctacctc
aagtccgaatacaaatacctcaccgtgcgcaccgccacgcgcagccacatcctggacggc
tcgctcaacgagttcgaggagcgctatccgcaccgcttcctgcgcgttcaccgcaatgcg
ctggtcgcgcgcgcagccattcgcgcgctcgagaaatacgacgacggcgaagacgccgag
ggctgggcgctgaggctcgacgccgttcccgagcccgtcgcggtgtcgcggcgccagctg
gcggccgtgcgcgaagtgatcaaggaagcgcgatga

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