Variovorax sp. PMC12: C4F17_11885
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Entry
C4F17_11885 CDS
T05380
Name
(GenBank) ribose ABC transporter permease
KO
K10440
ribose transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_11885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_11885
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
C4F17_11885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ81596
LinkDB
All DBs
Position
1:complement(2561442..2562467)
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AA seq
341 aa
AA seq
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MTTPTATTAATPGFSLKARLFRPATRQKMLAFASLIVLMVFFSIASPQFLQADNLVSILQ
STAVNGVLAIACTFVIITSGIDLSVGTLMTFCAVMAGVVLTYMGMPLALGIAAAILFGAL
AGFVSGVLIAKLKIPPFIATLGMMMLLKGLSLVISGTKPIYFNDTPGFTVISQDSLIGYL
VPSLPIPNAVLILFLVAVAASIVLNKTILGRYTFALGSNEEAVRLSGVNTDFWKVLVYTV
SGGICGIAGLLIASRLNSAQPALGQGYELDAIAAVVIGGTSLSGGTGTIVGTIIGAFIMS
VLTNGLRILSVAQEWQTVVTGVIIILAVYADILRRRGGSRH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacccccaccgccaccaccgctgccacgcccggcttctcgctgaaggcacggctc
tttcgtccggccacgcggcagaagatgctggcctttgccagcctgatcgtgctgatggtg
ttcttcagcatcgcgtcgccgcagttcctgcaggccgacaacctggtgagcattctccag
tcgaccgcggtgaacggcgtgctggcgattgcctgcaccttcgtcatcatcacttcgggc
atcgacctgtcggtgggcacgctgatgaccttctgcgccgtcatggccggcgtggtgctc
acctacatgggcatgccgctcgcgctcggcattgcggccgcgatacttttcggcgcgctg
gcgggcttcgtgtcgggcgtgctgatcgccaagctcaagataccgccgttcattgccacg
ctgggcatgatgatgctgctcaagggcctgtcgctggtgatctcgggcaccaagccgatc
tacttcaacgacacgccgggcttcaccgtcatctcgcaggactcgctgatcggctacctg
gttccgtcgctgccgattccgaatgcggtgctcatcctgttcctggtggccgttgccgcc
agcatcgtgctcaacaagaccatcctcgggcgctacaccttcgcgctcggcagcaatgag
gaagcggtgcggctctccggcgtgaacaccgatttctggaaagtgctggtctacacggtg
agcggcggcatctgcggcatagcaggtctgctgattgcctcgcgcctgaactccgcgcag
cctgcgctggggcagggctacgaactcgatgcgattgctgcggtggtcatcggcggcacg
tcgctcagcggtggcaccggcaccatcgtcggcaccatcatcggcgccttcatcatgagc
gtgctgaccaacggcctgcgcattctttcggtcgcgcaggagtggcagaccgtggtcacg
ggcgtgatcatcattcttgccgtgtacgcggacatccttcgccggcgcggcggcagcagg
cactga
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