Variovorax sp. PMC12: C4F17_12460
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Entry
C4F17_12460 CDS
T05380
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00270
Cysteine and methionine metabolism
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
C4F17_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_12460
03032 DNA replication proteins [BR:
vam03032
]
C4F17_12460
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_12460
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
vam02048
]
C4F17_12460
Enzymes [BR:
vam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
C4F17_12460
Transcription factors [BR:
vam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
C4F17_12460
DNA replication proteins [BR:
vam03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
C4F17_12460
Chromosome and associated proteins [BR:
vam03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
C4F17_12460
Prokaryotic defense system [BR:
vam02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
C4F17_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AVQ81697
LinkDB
All DBs
Position
1:2661688..2662602
Genome browser
AA seq
304 aa
AA seq
DB search
MRAIDLFAGAGGFSTGARMAGVDVVWAANHWQAAVDVHAANHPETAHACQDLQQADWRGV
PAHDLLMASPACQGHANARGKEKPHHDALRSTAWAVVSACEFHRPQAALVENVPEFTKWA
LFPAWCAAMSALGYAVAPHLIDSADHGVPQHRVRLFLVCTQGKHPLQLTFEPRTHVGADS
VIQFASGKWSPVIKPGRSTNTLARVAAGRARFGRRFVMPYYGSGSGLTGRCLSRPLGTVT
TVDRWALVDGDHMRMLTAAENRGAMGFPDSYTLPTNHRQAVHMLGNAVCPPVARDVINAL
KESA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgattgaccttttcgcaggagctggcggcttttcgaccggcgcgcgcatggca
ggcgtggatgtggtctgggccgcgaaccactggcaagccgcagtagatgtgcacgcggct
aatcacccggagaccgcacatgcatgccaggatctgcagcaggccgactggcgcggcgtg
ccagcccacgacctgctgatggcctcgcctgcttgccagggccatgccaacgcccgcggc
aaggaaaagccacaccacgatgcgctgcgcagcacggcctgggctgtggtgtctgcctgc
gagttccatcgccctcaggcggcgctggttgagaacgtgcccgagttcacgaagtgggcg
ttgttcccggcttggtgcgcggcgatgtcggcgctggggtatgcggtggcgccgcatcta
atcgactcggcagatcacggtgtcccgcagcaccgcgtgcgcttgttcctcgtgtgcacg
cagggtaagcacccgctgcagcttaccttcgagccccgcacgcacgtcggcgctgattca
gtgattcagttcgcatcgggaaaatggtcgcccgtcatcaagcctggccgctcgacaaac
acccttgctcgagtggctgccggccgcgcacggtttggccgccgcttcgtgatgccctac
tacggcagcggctcaggattgaccggtcgctgcctgtctcgtccgctcggcactgtcaca
acggtagaccgctgggctctggtcgatggcgatcacatgcgcatgctcaccgccgctgag
aaccgcggggccatgggattcccagacagctacacgcttccgacgaaccaccgccaagct
gtgcacatgctgggcaacgctgtctgccctccagttgcgcgcgacgtgatcaacgcattg
aaggaatccgcatga
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