Variovorax sp. PMC12: C4F17_12650
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Entry
C4F17_12650 CDS
T05380
Name
(GenBank) ABC transporter permease
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_12650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_12650
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C4F17_12650
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
AVQ81732
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Position
1:2699170..2699991
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AA seq
273 aa
AA seq
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MKSNNSWNPSWRLLACAAPAAAFFAAFWLLPVVRLLTLPADKGWATYFAVLTDSRYLASM
ANTVVLSITVTLATLVLGAAVGIYLARHAFVGKRMLLSLLTLPLSFPGVIIGFFVILLGG
RQGVVADLSDSLIGQRITFAYGLLGLFLAYLYFSLPRAIATYAAAAESMNTQLEEAARSL
GASRLRVARDVWMPELAPTTLACGAILFATSMGAFGTAFTLASKFEVIPITIYNEFTNYA
NFALAASLSISLGIVTWLVLFVARRFGANPVAR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaacaactcctggaacccaagctggcgcctgctggcctgcgcagcgcccgct
gccgccttcttcgcggccttctggctgctgccggtcgtgcgcctgctgacgctgcccgcc
gacaaaggctgggcaacctatttcgccgtgctcacggattcgcgctacctcgcgagcatg
gccaacacggtggtgctctccatcacggtcaccctcgccaccctggtgctgggcgcggca
gtgggcatctacctcgcgcggcatgccttcgtcggcaagcgcatgctgctgtcgctgctc
acgctgccgctgtcgttcccgggcgtgatcatcggcttcttcgtgatcctgctgggcggg
cgccaaggcgtggtcgcggacctcagcgacagcctgatcggccagcgcatcaccttcgcc
tacggcctgctcgggctgttcctggcgtacctttatttttcgctgccgcgcgccatcgcc
acctacgcagccgcagccgagtcgatgaacacccagctcgaggaagccgcgcgttcgctc
ggcgcctcgcggctgcgcgtggcacgcgacgtgtggatgcccgagctcgcgcccaccacg
ctggcctgcggcgcgatcctgttcgccacgtcgatgggcgccttcggcacggccttcacg
ctggccagcaagttcgaggtcattcccatcaccatctacaacgagttcaccaactacgcc
aacttcgcgctcgccgcgtcgctgtcgatctcgctgggcatcgtgacctggctggtgctg
ttcgtggcgcgccgcttcggcgccaatcccgtcgcacgctga
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