KEGG   Variovorax sp. PMC12: C4F17_12650
Entry
C4F17_12650       CDS       T05380                                 
Name
(GenBank) ABC transporter permease
  KO
K02053  putative spermidine/putrescine transport system permease protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_12650
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_12650
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    C4F17_12650
SSDB
Motif
Pfam: BPD_transp_1
Other DBs
NCBI-ProteinID: AVQ81732
LinkDB
Position
1:2699170..2699991
AA seq 273 aa
MKSNNSWNPSWRLLACAAPAAAFFAAFWLLPVVRLLTLPADKGWATYFAVLTDSRYLASM
ANTVVLSITVTLATLVLGAAVGIYLARHAFVGKRMLLSLLTLPLSFPGVIIGFFVILLGG
RQGVVADLSDSLIGQRITFAYGLLGLFLAYLYFSLPRAIATYAAAAESMNTQLEEAARSL
GASRLRVARDVWMPELAPTTLACGAILFATSMGAFGTAFTLASKFEVIPITIYNEFTNYA
NFALAASLSISLGIVTWLVLFVARRFGANPVAR
NT seq 822 nt   +upstreamnt  +downstreamnt
atgaagtccaacaactcctggaacccaagctggcgcctgctggcctgcgcagcgcccgct
gccgccttcttcgcggccttctggctgctgccggtcgtgcgcctgctgacgctgcccgcc
gacaaaggctgggcaacctatttcgccgtgctcacggattcgcgctacctcgcgagcatg
gccaacacggtggtgctctccatcacggtcaccctcgccaccctggtgctgggcgcggca
gtgggcatctacctcgcgcggcatgccttcgtcggcaagcgcatgctgctgtcgctgctc
acgctgccgctgtcgttcccgggcgtgatcatcggcttcttcgtgatcctgctgggcggg
cgccaaggcgtggtcgcggacctcagcgacagcctgatcggccagcgcatcaccttcgcc
tacggcctgctcgggctgttcctggcgtacctttatttttcgctgccgcgcgccatcgcc
acctacgcagccgcagccgagtcgatgaacacccagctcgaggaagccgcgcgttcgctc
ggcgcctcgcggctgcgcgtggcacgcgacgtgtggatgcccgagctcgcgcccaccacg
ctggcctgcggcgcgatcctgttcgccacgtcgatgggcgccttcggcacggccttcacg
ctggccagcaagttcgaggtcattcccatcaccatctacaacgagttcaccaactacgcc
aacttcgcgctcgccgcgtcgctgtcgatctcgctgggcatcgtgacctggctggtgctg
ttcgtggcgcgccgcttcggcgccaatcccgtcgcacgctga

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