Variovorax sp. PMC12: C4F17_12965
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Entry
C4F17_12965 CDS
T05380
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_12965
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_12965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_11
VWA
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
AVQ81791
LinkDB
All DBs
Position
1:complement(2762257..2763852)
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AA seq
531 aa
AA seq
DB search
MSLWSRRLALTLLAALSLGLAACGKDESQGTPAPAADTAAFSILAGSELKDIEGPIVDAA
KAAGVEVKFSYAGTLDIVERINAGERFDAILPPNGAYPALALQTKPLARDKLFYSRIALG
VKNAKAAQLGWNRKPPGWAEIAKAAGSGQLRYGMTNATSSNTGMSALFAVASALAGKTED
LTAQDVDEKTLKAFLSGQKLTAGSSGWLADAYVKDPSAIDAMVNYEAVILRANEKLPKAD
QLALIYPRDGMISADYPLMLLNDRKRDAYTRLVGALKAAPFQRDALSAAFLRPANPEVAA
ASALPTAAVAELGFPNRLEVIDAVLGTYQSQWRKPATSIFVLDLSGSMQGARLESMREAL
KLLSGADAAGTAAATASTRYSAFQSRERVVLITFATRVQAPVWVRFEADQIDSARAELRQ
RADAMKADGGTAIYSALAAAEDLARQEQQNEPGRFVSIVLLTDGENNSGLRPSEFHDRYA
AGGLPARIFPILFGEGNVDEMRQIAQLSGGREFDGRKLRLAQVFKEIRGYQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctgtggtcgcgccggctggcgctgacgctgctggcggcgttgtcgctgggcctt
gcggcttgcggcaaggatgaatcgcagggcaccccggcgcctgctgcagatacggccgcc
ttctccatcctcgcgggctcggaactgaaggacatcgaaggccccatcgtcgatgccgcc
aaggcggccggcgtggaggtgaagttctcgtacgccggcacgctggacatcgtcgagcgc
atcaacgccggcgagcgcttcgacgcgatcctgccgcccaacggcgcctacccggcgctg
gcgctgcagaccaagccgctggcgcgcgacaagctcttctactcgcgcattgcgctcggc
gtgaagaacgccaaggccgcgcagctcggctggaaccggaagccgccgggctgggccgag
atcgccaaggccgcgggctccggccagctgcgctacggcatgaccaacgccaccagctcc
aacaccggcatgagcgcgctcttcgccgtggcctccgcactggccggcaagacggaagac
ctgacggcgcaggacgtggacgagaagacgctcaaggcctttctctcgggccagaagctc
acggcgggcagctcgggctggctggccgacgcctacgtgaaagacccgtcagccatcgac
gcgatggtcaactacgaggcagtgatcctgcgcgccaacgagaagctgcccaaggccgac
cagctcgcgctgatctacccgcgcgacggaatgatctcggccgactatccgctgatgctg
ctcaacgaccgcaagcgcgatgcctacacccggctggtcggcgcgctcaaggccgcgccg
ttccagcgcgatgccttgtcggctgctttcctgcgccccgccaatccggaggttgccgcc
gccagcgcgctgcccaccgccgccgtggccgagctgggttttcccaaccggctggaggtg
atcgacgcggtgctcggcacctaccagtcgcaatggcgcaagcccgccacctcgatcttc
gtgctcgacctcagcggctcgatgcagggcgcgcggctggagtcgatgcgcgaggcgctc
aagctgctgtcgggcgcagatgcggccggcaccgccgcggccaccgccagcacgcgctac
agcgctttccagagccgcgagcgcgtggtgctcatcaccttcgccacccgggtgcaggcc
ccggtgtgggtgcgcttcgaagccgaccagatcgacagcgcccgcgccgagctgcgccag
cgcgccgatgccatgaaggccgacggcggcaccgccatctactcggcgctggccgccgcc
gaagacctcgcgcggcaggagcagcagaacgagcccgggcgcttcgtcagcatcgtgctg
ctgaccgacggcgagaacaactccgggctgcggccgagcgagttccacgaccgctatgcg
gcaggcggcctgccggcgcgcatcttcccgatcctgttcggcgaaggcaacgtggacgag
atgcggcagatcgcgcagctctctggaggccgcgaattcgacggccgcaagctgcggctg
gcgcaggtgttcaaggaaatccggggctaccagtga
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