Variovorax sp. PMC12: C4F17_13005
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Entry
C4F17_13005 CDS
T05380
Name
(GenBank) MurR/RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vam03000
]
C4F17_13005
Transcription factors [BR:
vam03000
]
Prokaryotic type
Helix-turn-helix
Other families
C4F17_13005
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
TerB_C
DUF7696
Motif
Other DBs
NCBI-ProteinID:
AVQ81799
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Position
1:complement(2773575..2774474)
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AA seq
299 aa
AA seq
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MTPSLLQKIAQIRSDAPATRRAILDLILEDPDRVLEESFEQLAERSRSSVPTIMRTCRDL
GFAGLREFKLALAQELALGGSPLHRRVNIEDAADEVVGKIARSAAASVSGVRGQLDMQVL
DGAVAAIAAAPHVDLYGAGATSWFMANDLQARLFRLGLSANAWADYHLQQVAGAAQRPGG
VVIAISHVGGMPSLLDAVDIARGQGAKVVALTRPGTALAAKADFLLGLSVPDDAVMHVGI
DAYLTHLTAIEILTVLVAQRRGEPAVQRLQRARDAFQRHGIDATTHPLQSWDGGGVKHG
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctccctgctccagaaaatcgcgcagatacgcagcgacgccccggcgacgcgg
cgcgcgattctcgacctgatcctcgaagaccccgaccgcgtgctcgaagagagcttcgaa
cagctggccgagcgctcgcgcagctcggtgccgaccatcatgcgcacctgccgcgacctc
ggttttgccgggctgcgcgagttcaagctcgcgctcgctcaggagctggcgctcggcggc
tcgccgctgcaccgccgcgtgaacatcgaggacgcggccgatgaagtggtcggcaagatc
gcgcgcagcgcggcggcatcggtctcgggcgtgcgcgggcagctcgacatgcaggtgctc
gacggcgcggtggcggccatcgcggcggcgccgcatgtggacctgtacggcgcgggcgcc
acatcgtggttcatggccaacgacctgcaggcgcggctgttccgcctgggcctgtcggcc
aatgcctgggccgactaccacctgcagcaggtggccggcgcggcgcagcgcccgggcggc
gtggtcatcgccatatcgcacgtgggcggcatgccgtcgctgctcgacgcggtggacatc
gcgcgcgggcagggcgccaaggtggtcgcgctcacgcggcccggcacggcgctcgcggcc
aaggccgactttcttctgggcctgtcggtgcccgacgacgcggtgatgcacgtgggcatc
gacgcctacctgacgcacctcacggccatcgagatactgacggtgctggtggcgcagcgg
cgcggcgagcccgcggtgcagcgcctgcagcgcgcgcgcgatgcgttccagcggcacggc
atcgatgcgaccacgcatccgctgcaaagctgggacggcgggggtgtcaagcatggctga
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