Variovorax sp. PMC12: C4F17_13315
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Entry
C4F17_13315 CDS
T05380
Name
(GenBank) glutamate synthase subunit alpha
KO
K00265
glutamate synthase (NADPH) large chain [EC:
1.4.1.13
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00250
Alanine, aspartate and glutamate metabolism
vam00910
Nitrogen metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
C4F17_13315
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
C4F17_13315
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vam01002
]
C4F17_13315
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.13 glutamate synthase (NADPH)
C4F17_13315
Peptidases and inhibitors [BR:
vam01002
]
Cysteine peptidases
Family C44
C4F17_13315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
Glu_syn_central
GXGXG
Motif
Other DBs
NCBI-ProteinID:
AVQ81855
LinkDB
All DBs
Position
1:complement(2831397..2836154)
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AA seq
1585 aa
AA seq
DB search
MTTAAEIQHLQEHGLYSGADEHDACGVGFVAHIKGEKSHAIVLQGLKILENLDHRGAVGA
DKLMGDGAGILIQLPDHLYREEMAKQGVTLPPPGEYGVGMIFLPKEHASREACEQEMERA
IKAEGQVLLGWRDVPVNRDMPMSPTVREKEPLLRQVFIGRGNDVIVQDALERKLYVIRKT
ASANIQRLKLKHSKEYYVPSMSSRTVVYKGLLLADQVGTYYLDLQDKRCVSALGLVHQRF
STNTFPEWPLAHPYRYVAHNGEINTVKGNYNWMKAREGVMSSPVLGADLQKLYPISFAGQ
SDTATFDNCLELLTMAGYPISQAVMMMIPEPWEQHATMDPRRRAFYEYHAAMLEPWDGPA
SIVFTDGRQIGATLDRNGLRPSRYCVTDDDLVIMASESGVLPVPEQKIVRKWRLQPGKMF
LIDLEQGRMIDDEEVKANLANSKPYKQWIENLRIKLDSVKAEPVSAPLSQVALLDRQQAF
GYTQEDIKFLMSPMAQAGEEGIGSMGNDSPLAVLSSKNKPLYNYFKQLFAQVTNPPIDPI
REAIVMSLVSFIGPKPNLLDINQVNPPMRLEVSQPILDFADMAKLRDIGKYTQGKFKSYV
LDITYPLAWGDEGVEAKLASLCAEAVDAIKGGHNILIISDRGVSPTQVAIPAVLALSAVH
QYLVREGLRTTAGLVVETGSAREVHHFGVLAGYGAEAVHPYLAMETLVAMHADLPGDLSA
DKAVYNYVKAIGKGLSKIMSKMGVSTYMSYCGAQLFEAIGLNSETVNKYFTGTASRVEGI
GVFEIAEEAIRMHKAAFGDDPVLANMLDAGGEYAWRTRGEEHMWTPDAIAKLQHSTRANN
WNTYKEYAQLINDQNRRHLTLRGLFEFKIDPAKAIPVDEVEAASEIVKRFATGAMSLGSI
STEAHSVLAVAMNRIGGKSNTGEGGEDPARYRNELKGIPIKQGDTLKSVIGAANVEVDMP
LRDGDSLRSRIKQVASGRFGVTAEYLHSADQIQIKMAQGAKPGEGGQLPGGKVTEYIGKQ
RYAVPGVGLISPPPHHDIYSIEDLAQLIHDLKNTAPHASISVKLVSEIGVGTIAAGVAKC
KSDHVVIAGHDGGTGASPWSSIKHAGSPWEIGLAETQQTLVLNRLRSRIRVQADGQMKTG
RDVAIGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVGVATQDPVLRKKFSGKPEHVV
NYFFFVAEEVRQIMAQLGIRKFDDLIGRADLLDMRKGIEHWKASGLDFSRLFALPSVPAD
VPRFHVENQDHGLDKALDVKLIEKSRPAIEKGEKVQFIEVARNVNRSVGAMLSGALTKVH
PQGLPDDSIRIQLEGTGGQSFGAFLARGITLYLIGDANDYTGKGLSGGRVVVRPSLDFRG
EAVRNTIVGNTALYGATTGEAYLCGVAGERFAVRLSGATAVIEGTGDHGCEYMTGGTVAV
LGKTGRNFAAGMSGGVAFVYDEDGQFASRCNLSMVSLDKVLTSAEQTASVHRKIWHGGET
DEAQLKKLLGEHHRWTGSKRARELLDNWAVSRTKFVKVFPNEYKRALAELHDRKVELTST
GNNAHIGLEPHALTAPAPQTAPASV
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggctgccgagattcaacatctccaagaacacggtctgtattccggtgccgac
gagcacgatgcctgcggcgtcggcttcgtcgcacacatcaagggcgagaaaagccatgcc
atcgtgctgcagggcttgaagatcctcgaaaacctcgaccatcgcggcgccgtcggtgcc
gacaagctgatgggcgacggcgccggcatcctgatccaactgcccgaccacctgtaccgc
gaagaaatggcgaagcagggtgtcacgctgcccccgccgggcgagtacggcgtcggcatg
atcttcctgccgaaggaacacgcttcgcgcgaagcctgcgaacaggaaatggaacgcgcc
atcaaggccgaaggccaggtgctgctcggctggcgcgacgtgccggtcaaccgcgacatg
cccatgtcgcccaccgtgcgcgaaaaagaaccgctgctgcgccaggtgttcatcggccgc
ggcaacgacgtgatcgtgcaggacgcgctggaacgcaagctctacgtgatccgcaagacc
gccagcgccaacatccagcgcctgaagctcaagcacagcaaggaatactacgttcccagc
atgtcgagccgcaccgtggtctacaagggcctgctgctggccgaccaggtcggtacctac
tacctcgacctgcaggacaagcgctgcgtctcggccctgggcctggtgcaccagcgcttc
tcgaccaacaccttcccggagtggccgctggcccacccgtaccgctacgtcgcccataac
ggcgaaatcaacacggtcaagggcaactacaactggatgaaggcccgcgaaggcgtgatg
tcctcgcccgtgctgggcgccgacctgcagaagctctacccgatcagcttcgccggccag
tccgacaccgccaccttcgacaactgcctcgagctgctgacgatggccggctaccccatc
agccaggccgtgatgatgatgattcccgagccctgggaacagcacgccaccatggacccg
cgccgccgcgcgttctatgagtaccacgccgccatgctcgagccgtgggacggcccggcc
tccatcgtgttcaccgacggccgccagatcggcgccacgctcgaccgcaacggcctgcgt
ccctcgcgctactgcgtgaccgacgacgacctggtcatcatggcctccgaatcgggcgtg
ctgcccgtgcccgagcagaagatcgtgcgcaagtggcgcctgcagcccggcaagatgttc
ctgatcgacctggaacagggccgcatgatcgacgacgaggaggtcaaggccaacctcgcc
aacagcaagccctacaagcagtggatcgagaacctgcgcatcaagctcgacagcgtcaag
gccgagccggtctccgcgccgctctcgcaagtcgcgctgctcgaccgccagcaggccttc
ggctacacccaggaagacatcaagttcctgatgagcccgatggcgcaggccggcgaagag
ggcatcggctccatgggcaacgacagcccgctggccgtgctctcgagcaagaacaagccg
ctgtacaactacttcaagcagctgttcgcgcaggtgacgaatccgccgatcgacccgatc
cgcgaagccatcgtgatgtcgctggtgtccttcatcggccccaagcccaacctgctggac
atcaatcaggtcaacccgccgatgcggctcgaagtgagccagccgatcctcgacttcgcc
gacatggcgaagctgcgcgacatcggcaagtacacgcagggcaagttcaagagctacgtg
ctcgacatcacctaccccctcgcgtggggcgacgaaggcgtcgaagccaagctggcctcg
ctgtgcgccgaagcagtggacgccatcaagggcggccacaacatcctgatcatcagcgac
cgcggcgtgagcccgacgcaggtggccattcccgccgtgctggcgctgtcggccgtgcac
cagtacctggttcgcgaaggcctgcgcaccacggccggcctggtggtcgagaccggctcg
gcgcgcgaagtgcatcacttcggcgtgctggccggctacggcgcggaagccgtgcacccg
tacctcgccatggaaacgctggtggccatgcatgccgacctgccgggcgacctcagcgcc
gacaaggcggtctacaactacgtcaaggccatcggcaagggcctgtcgaagatcatgtcg
aagatgggtgtcagcacctacatgagctactgcggcgcccagctgttcgaagccatcggc
ctgaacagcgagacggtcaacaagtacttcaccggcaccgccagccgcgtggaaggcatc
ggcgtcttcgagatcgccgaggaagccatccgcatgcacaaggccgccttcggcgacgac
ccggtgctcgccaacatgctcgacgccggcggcgaatacgcctggcgcacgcgcggcgag
gagcacatgtggacgcccgacgccatcgccaagctgcagcacagcacgcgcgccaacaac
tggaacacgtacaaggaatacgcccagctcatcaacgaccagaaccgccgccacctcacg
ctgcgcggcctgttcgagttcaagatcgaccccgccaaggccattccggtcgacgaagtc
gaggctgcgtccgaaatcgtgaagcgcttcgccaccggcgcgatgtcgctcggctcgatc
agcaccgaggcgcactcggtgctggccgtggccatgaaccgcatcggcggcaagagcaac
accggcgaaggcggtgaagaccccgcgcgctaccgcaacgaactcaagggcatcccgatc
aagcagggcgacacgctcaagagcgtgatcggcgcggccaacgtcgaggtcgacatgccg
ctgcgcgacggcgactcgctgcgctcgcgcatcaagcaggtcgcgtcgggccgcttcggc
gtcacggccgagtacctgcattcggccgaccagatccagatcaagatggcacagggcgcc
aagccgggcgagggcggccagctgccgggcggcaaggtcaccgagtacatcggcaagcag
cgctatgcggtgccgggcgtgggcctgatctcgccgccgccgcaccacgacatctactcg
atcgaagacctggcgcagctgattcacgacctgaagaacaccgcgccgcacgccagcata
agcgtgaagctggtgagcgagatcggcgtgggcaccatcgccgcgggcgtcgccaagtgc
aagagcgaccacgtcgtgatcgccggccatgacggcggcacgggcgcatcgccctggtcg
tccatcaagcatgcgggcagcccgtgggaaatcggcctggccgagacgcagcagacgctg
gtgctcaaccgcctgcgcagccgcatccgcgtgcaggccgacggccagatgaagactggc
cgcgacgtcgccatcggcgcgctgctgggcgccgacgagttcggctttgccacggcgccg
ctggtggtcgagggctgcatcatgatgcgcaagtgccacctgaacacctgcccggtgggc
gtggccacgcaagacccggtgctgcgcaagaagttctccggcaagcccgagcacgtcgtc
aactacttcttcttcgttgccgaagaagtgcgccagatcatggcccagttgggcatccgc
aagttcgacgacctgatcggccgtgccgacctgctcgacatgcgcaagggcatcgagcac
tggaaggcctcgggcctcgacttcagccgcctgttcgcgctgccgagcgtgccggccgac
gtgccgcgcttccatgtcgagaaccaggaccacggcctggacaaggcgctcgacgtgaag
ctcatcgagaagtcgcgccccgccatcgagaagggcgagaaggtgcagttcatcgaggtg
gcgcgcaacgtcaaccgctcggtgggcgccatgctctcgggcgcgctgaccaaggtgcat
ccgcagggcctgcccgacgactcgatccgcatccagctcgaaggcacgggcggccagtcg
ttcggcgccttcctggcgcgcggcatcacgctgtacctgatcggcgacgccaacgactac
accggcaagggcctctcgggcggccgcgtggtggttcgacccagcctcgacttccgcggc
gaagcggtgcgcaacaccatcgtcggcaacaccgcgctgtacggcgcgaccaccggcgag
gcctacctgtgcggcgtggccggcgagcgcttcgcggtgcgcctgtcgggcgccacggcg
gtcatcgaaggcaccggcgaccacggctgcgaatacatgaccggcggcacggtcgccgtg
ctcggcaagacgggccgcaacttcgcggccggcatgagcggcggcgtcgccttcgtgtac
gacgaagacggccagttcgcctcgcgctgcaacctctcgatggtgtcgctcgacaaggtg
ctgacctcggccgagcagaccgcgagcgtgcaccgcaagatctggcacggcggcgagacc
gacgaagcccagctcaagaagctgctcggagagcaccatcgctggaccggcagcaagcgc
gcgcgcgagctgctcgacaactgggccgtgtcgcgcaccaagttcgtgaaggtgttcccg
aacgaatacaagcgcgcgctggccgagctgcacgaccgcaaggtcgagctcaccagcacc
ggcaacaacgcgcacatcggcctcgagccgcatgcgctgacggcccccgcaccgcaaacg
gccccggcttcggtctga
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