Variovorax sp. PMC12: C4F17_13360
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Entry
C4F17_13360 CDS
T05380
Name
(GenBank) type IV pilus secretin PilQ
KO
K02666
type IV pilus assembly protein PilQ
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vam02044
]
C4F17_13360
02035 Bacterial motility proteins [BR:
vam02035
]
C4F17_13360
Secretion system [BR:
vam02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
C4F17_13360
Bacterial motility proteins [BR:
vam02035
]
Pilus system
Pilus assembly proteins
C4F17_13360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
AMIN
Secretin_N
STN
type_II_gspD_N0
Motif
Other DBs
NCBI-ProteinID:
AVQ81863
LinkDB
All DBs
Position
1:complement(2843377..2845548)
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AA seq
723 aa
AA seq
DB search
MNQKKSTMAQWLRAAGLGLLTLGAWAVAHAQNAIESVTSSTQSGAEVIRIDLAQPLAAVP
AGFAVQTPARIALDFPGVTNAIGRSAIEVNQGNLRSVNVVQAGDRSRVVLNLKQATAYKA
EIQGKSLLVVLEPVAGTALAVSAATTFAENRNRDTLPLRDVDFRLGSDNTGRVIVDLPNN
QVGVDVKQQGKNLVVEFTKSTLPEGLRRRLDVADFGTPVQLITSQQAGDRVRMTIEAKGD
WEHSAYQSENQFVVEMRARKVDPTKLTQGVGYNGEKLSLNFQNIEIRSLLQVIADFTNFN
IVTSDSVTGALTLRLKDVPWDQALDIIMQAKNLGMRKNGSVLWIAPKDEINAKEKLEFEA
KATIENLEPLRTQSFQLNYTKAIAIAQGLTGTGASGGGGGGGGTTTRILSPRGSVIAESR
TNQLFVSDIPSRLAQIADLIQKLDIPVRQVLIEARIVEASDTFGKSLGVKLGGGVINRNN
SFGTWPSVTGGGTTSSSTTTGGTTTLSSTTTSPTVTFGSPTSSNFINLPAGDAGGTGNSA
GSFAFSLFNSSFSRMLNLEISALEADGKGKLVSSPRVITADQTKALIEQGEEIPYQQATS
SGATSISFRKAVLKLEVTPQITPEGNIILTLDVSKDARGVNTSAGPAINTKHVQTEVLVE
NGGTVVIGGIFELTETNDESRVPVLGEVPYLGALFRKRERVANKTEMLVFITPKMITDRN
AAR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaaaaatcaacgatggcacagtggctgcgcgctgccgggctgggtctgctg
accttgggcgcctgggccgtggcccatgcgcagaacgcgatcgaatccgtcaccagctcg
acgcaatccggcgcggaagtgatccgcatcgatctcgcgcagccgctcgccgcggttccg
gcgggattcgccgttcagacgcctgcacgcatcgcgcttgatttcccgggcgtcacgaac
gccatcggacgctccgccatcgaagtgaaccagggcaacctgcgctcggtcaacgtggtc
caggccggcgaccgcagccgcgtggtgctgaacctgaagcaggcaaccgcctacaaggcc
gaaatccagggcaagtcgctgctggtcgtgctcgagcccgtggccggtacggcgcttgcc
gtgtccgccgccaccaccttcgccgagaaccgcaaccgcgacaccctgccgctgcgcgat
gtcgacttccgcctcggctccgacaacaccggccgagtgatcgtcgatctgccgaacaac
caggtcggcgtcgacgtcaagcagcagggcaagaacctcgtcgtcgagttcaccaagtcg
accttgcccgaaggcctgcgccgccgcctcgacgtggcggacttcggtaccccggtgcag
ctgatcacctcgcaacaggccggcgaccgcgtgcgcatgaccatcgaggccaagggcgac
tgggagcacagcgcctaccagagcgaaaaccagttcgtggtcgagatgcgggcccgcaag
gtcgatccgaccaagctgacccagggcgtcggctacaacggcgaaaagctctcgctgaac
ttccagaacatcgagatccgttcgctcctgcaggtgatcgccgacttcacgaacttcaac
atcgtgacctccgactcggtgaccggcgccctgacgctgcgcctgaaggacgtgccctgg
gaccaggcgctcgacatcatcatgcaggcgaagaacctgggcatgcgcaagaacggcagc
gtgctgtggatcgcgcccaaggatgagatcaacgccaaggaaaagctcgaattcgaggcc
aaggccacgatcgagaacctggagccgctgcggacccagtcgttccagctcaactacacc
aaggccattgccattgcgcaaggcctgaccggcacgggcgcctccggcggtggcgggggc
ggtggtggtaccaccacccgtatcctgagcccccgtggcagcgtgatcgcggaatcccgc
acgaaccagttgttcgtgtcggacatcccgtcgcggctcgcgcagatcgccgacctcatc
cagaagctggacatcccggtgcggcaggtgctgatcgaagcccggatcgtcgaagcttcc
gacaccttcggcaagtcgctgggcgtcaagctgggcggcggcgtgatcaaccgcaacaac
tcgttcggcacctggccctcggtgaccggcgggggaaccacctcttcgtccacgacgacc
ggcggcaccacgacgctgagctcgaccaccacgagcccgaccgtcactttcggctcgccg
accagcagcaacttcatcaacctgcctgcaggcgatgcgggcggcacgggcaactcggcc
ggttccttcgcgttctcgctcttcaattcgagcttctcgcgcatgctgaacctcgaaatc
tccgcgctcgaagccgatggcaagggcaagctggtttccagcccccgcgtgatcacggcc
gaccagaccaaggcgctgatcgagcagggcgaggaaattccctaccagcaggccacgtcc
agcggcgcgacctccatttcgttccgcaaggccgtgctgaagctggaagtgacgccgcag
atcacgcccgagggcaacatcatcctgaccctggacgtgagcaaggatgcgcgcggcgtc
aacacttccgccggcccggccatcaacaccaagcacgtgcagaccgaagtgctggtcgag
aacggcggcacggtcgtcatcggtggtatcttcgaactcaccgaaaccaatgacgaatcg
cgcgtgccggtgctgggtgaagtgccctacctgggtgcactgttccgcaagcgcgaacgc
gttgccaacaagactgaaatgctcgtctttatcaccccgaagatgattaccgaccgcaac
gccgcgcgctga
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