Variovorax sp. PMC12: C4F17_13440
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Entry
C4F17_13440 CDS
T05380
Name
(GenBank) lipid A biosynthesis acyltransferase
KO
K02517
Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:
2.3.1.241
2.3.1.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00540
Lipopolysaccharide biosynthesis
vam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C4F17_13440
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_13440
Enzymes [BR:
vam01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.241 Kdo2-lipid IVA acyltransferase
C4F17_13440
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Lipid A
C4F17_13440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lip_A_acyltrans
Motif
Other DBs
NCBI-ProteinID:
AVQ81879
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All DBs
Position
1:complement(2861092..2861976)
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AA seq
294 aa
AA seq
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MSLGSRLGIGFMRAIAPLPLPLVRGFGAILGRILHTVAVPRRRVVDTNLAVCFPGKSEAE
RRAIARETFVFVAQSWLDRGWLWHAPEKVVASRLKVVGAASEIREIAEGDAPMILFAPHF
YGLDAAATALTMHTARPSATIYTTQRDPMVDAWIREGRTRFGDVAALNRVDGIKPVLQGL
RKGGLLYLLPDMDFGRDQTIFVPFYGVQAATVPSLSRFARLGKAKVVPVVSKLTRDGYEI
QVLPTWQNFPTDDVEADTALMNERLKGYIDTMPSQYYWVHRRFKTRPEGEPPIY
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcggttcccgactcggcatcggcttcatgcgcgcgatcgcgccgctgcccctg
ccgctggtgcgcggcttcggcgcgatcctcggccgcatcctgcataccgtggccgtgccg
cggcggcgcgtggtcgacaccaacctcgcggtctgcttccccgggaagtcggaggccgag
cgccgcgccatcgcgcgcgagaccttcgtcttcgtggcgcagtcgtggctcgaccgcggc
tggctctggcatgcccctgaaaaggtggtggcgagccggctgaaggtggtcggcgcggct
tcggagatccgcgagatcgccgagggcgacgcgccgatgatcctgttcgcgccgcacttc
tacggcctcgacgccgcggccaccgcgctgaccatgcacacggcgcgcccctcggccacc
atctacacgacccagcgcgacccgatggtcgatgcctggatccgcgaaggccgcacccgc
ttcggcgacgtggcggcgctcaaccgggtggacggcatcaagccggtgctgcagggcctg
cgcaagggcggcttgctgtacctgctgcccgacatggacttcggccgcgaccagaccatc
ttcgtgccgttctacggcgtgcaggcggccaccgtgccttcgctgtcgcgctttgcgcgg
ctgggcaaggccaaggtggtgccggtggtgtcgaagctcacgcgcgacggctacgagatc
caggtgctgccgacctggcagaacttcccgaccgacgatgtcgaggccgacacggcgctc
atgaacgagcggctgaagggctacatcgacacgatgccttcccagtactactgggtgcac
cgccgcttcaaaacgcgccccgagggcgagcctcctatatattga
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