Variovorax sp. PMC12: C4F17_13900
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Entry
C4F17_13900 CDS
T05380
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_13900
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C4F17_13900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA
AAA_29
SbcC_Walker_B
AAA_16
AAA_22
MMR_HSR1
NB-ARC
PufQ
Zeta_toxin
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AVQ81962
LinkDB
All DBs
Position
1:complement(2966320..2968611)
Genome browser
AA seq
763 aa
AA seq
DB search
MQHHDPVGTREGETEAASDALKNRLAVAENVLVILSVDLDDQLRFACGLVALTDRRLIAL
DPGGEWREWPLTDASLALRLSDHSGVGTLDLTGSEGRLGRWRYTLAHQVAALRLLKLFGQ
RMSDVAKATPEPAEAADGDDAAVADTELQTPPSTWVLLRLGRFAKPYRKQLILGFVLTLI
STAATLVPPYLTIPLMDDILIPFQNGQKIDTMRVGLYLGGLLVAALVGWGLGWARTYLLA
LVSERIGADLRTTTYEHLLTLPLDYFGGKRTGDLMARIGSETDRINVFLSLHALDFANDV
LMIVMTAVILISINPLLAVVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADT
IPGIRVVKAFAQERREAERFRVANAYNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWAFG
IWQVARGSITVGVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPE
PANPVKVERVQGRIEMSGLGFRYGSRAVIHDLDLVIEPGEMIGLVGHSGSGKSTLVNLIC
RFYDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATREEIV
AAARAAHAHDFILRLQHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAV
DTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAKQGA
YWRLYQAQLRQADDDASEGAANERASAQAPLPIAHAAHPAGDA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcacgatccagtcggcacccgggagggcgaaacagaggcggcttcagacgcg
ctgaaaaaccggctcgcagtcgcggaaaacgttctggtaatactgtcggttgacctcgac
gaccaacttcgcttcgcttgcggcctagtcgccctgactgaccggcgcctgatcgcgctc
gatccgggcggcgaatggcgtgagtggccactgacggacgcctccctggcgctgcggctt
tccgaccattccggcgtcggaacccttgatttgacgggctccgagggccggttgggccgc
tggcgctacaccctggcccaccaggtggcggcgctgcgcctgctcaagcttttcggtcag
cgcatgtccgatgtcgccaaggcgacacccgagccggccgaggccgccgacggcgacgat
gccgccgttgccgacaccgaactccagaccccgccctcgacctgggtgctgctgcgcctg
ggccgtttcgccaagccgtaccgcaagcagctgatcctggggtttgtcctgaccctgatt
tccaccgccgccaccctggtgccgccgtacctgaccatcccgctgatggacgacatcctg
attccgttccagaacgggcagaagatcgacaccatgcgcgtcggcctgtacctgggcggc
ctgctggtcgcggcgctggttggctgggggctgggctgggctcgcacctacctgctggcg
ctggtgtccgagcgcatcggcgccgacctgcgcaccaccacctacgagcacctgctgacc
ctgccgctcgactatttcggcggcaagcgcaccggcgacctgatggcgcgcatcggctcg
gaaaccgaccgcatcaacgttttcctgtcgctgcacgcactggatttcgccaacgacgtg
ctgatgatcgtgatgaccgccgtcatcctgatctccatcaatccgctgctggcggtggtc
acgctggtgccgctgcccttcatcgcctggatgatccacgtcgtgcgcgaccgcctgcgc
accggcttcgagaagatcgaccgcgtctggtcggaggtgaccaacgtgctggccgacacc
attcccggcatccgcgtggtcaaggccttcgcgcaggaacgccgcgaggccgagcgcttc
cgcgtcgccaacgcctacaaccttcaggtcaacgacaagctcaaccgcacctggtcgctg
ttcacgccgaccgtgtcgctgctcaccgaaatcggcctgctcgtggtctgggccttcggc
atctggcaggtggcgcgcggcagcatcacggtgggcgtgctcaccgccttcatcgcgtac
atcggccgtttctatacgcgtctcgattccatgagccgcatcgtctcggtcacgcagaag
gcggcggcgggcgccaagcgcatcttcgacatcctcgaccacgtgagcaacgtgcccgag
ccggccaacccggtgaaggtcgagcgcgtgcaggggcgcatcgagatgagcgggctgggt
ttccgctacggctcgcgcgccgtcatccacgacctcgacctggtgatcgagcccggcgag
atgatcggcctggtgggccacagcggctcgggcaagagcacgctggtcaacctgatctgc
cgcttctacgacgtgaccgacggcgccatcaaggtcgacggcaccgacatccgccgcttc
gccgtggccgactaccggcgccacgtagggctggtgctgcaggagccgttcctgttcttc
ggcaccatcgcgcagaacatcgcctacggcaagcccgacgccacgcgcgaagagatcgtg
gccgccgcgcgcgctgcgcacgcgcacgacttcatcctgcggctgcagcacggctacgac
tcgctggtgggcgagcgcgggcagggcctgtcgggcggcgagcgccagcgcatcagcatc
gcgcgggcgctgctgatcgacccgcgcatcctgatcctcgacgaggccacctcggcggtg
gacaccgagaccgagaaggaaatccagaaggcgctcgacaacctcgtgcagggccgcacc
accatcgccatcgcgcaccgcctgtcgacgctgcgcaaggccgaccggctcgtggtcatg
gaccgcggcgaagtggtcgaggtcgggccgcacgacgccttgatggcgaagcagggcgcc
tactggcggctctaccaggcgcagttgcgccaggccgatgacgatgcgagcgaaggtgcc
gcgaacgagcgcgccagcgcgcaggcacctttgcccatcgcccacgcagcccatccggcg
ggggacgcatga
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