Variovorax sp. PMC12: C4F17_13940
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Entry
C4F17_13940 CDS
T05380
Name
(GenBank) sugar ABC transporter permease YjfF
KO
K23509
galactofuranose transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_13940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_13940
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Galactofuranose transporter
C4F17_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
FtsX
DUF6097
Motif
Other DBs
NCBI-ProteinID:
AVQ81970
LinkDB
All DBs
Position
1:complement(2977823..2978860)
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AA seq
345 aa
AA seq
DB search
MSAVIDVTPSPQPSPASPARGKGSRKGLNPKYLPLAATISLFVLVATLGSVFYDGFFSAQ
VFLNLLIDNAFLIVVAVGMTFVILSGGIDLSVGSVIALTTMVSASLVEKHGWSPGVVIPL
VLVMGTAFGAFMGLLIERYRLQPFIVTLAGMFLARGLCYLISIDSISITNAFYSEVSQIR
IPVWGEASVSISAVIAVAVLLAAIFIAHCTPFGRAVYAIGGSEHSAMLMGLPVRRTLIGV
YTLSGFCSALAGVIFTFYMLSGYGLHAVGLELDAIAAVVIGGTLLTGGVGYVAGTLFGVL
MLGIIQTLISFDGTLSSWWTRIVVGALLFVFCLLQRFFTSRAPRR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggtgatcgacgtgaccccctcgccgcaaccttctcccgcttctcccgcgcgc
gggaaaggaagcaggaaggggctcaaccccaagtacctgccgctggcggcgaccatctcg
ctgttcgtgctggtggccacgctgggttcggtcttctacgacgggttcttttcggcgcag
gtgttcctcaacctgctgatcgacaacgccttcctcatcgtcgtggcggtgggcatgacc
ttcgtgatcctctcgggcggcatcgacctgtcggtgggctcggtgatcgcgttgaccacc
atggtgtcggcctcgctggtagaaaaacacggctggagccccggcgtggtgattccgctg
gtgctggtgatgggcacggccttcggcgccttcatggggctgctgatcgaacgctaccgg
ctgcagcccttcatcgtcacgctggcgggcatgttcctggcgcgcgggctgtgctacctc
atcagcatcgactcgatcagcatcaccaacgctttctattcggaggtctcgcagatccgc
attccggtctggggcgaggcctcggtgtcgatcagcgcggtgatcgcggtggcggtgctg
ctggcggcgatcttcatcgcgcattgcacgcccttcggccgcgcggtgtacgccatcggc
ggcagcgagcattcggccatgctgatgggcctgccggtgcgccgcacgctcatcggcgtg
tacacgctctcgggtttctgctcggcgctggcgggcgtgatcttcacgttctacatgctc
tcgggctacggcctgcatgcggtggggctggagctcgatgccatcgcggcggtggtgatc
ggcggcacgctgctcacgggcggcgtgggctacgtggcgggcacgctgttcggcgtgctg
atgctcgggatcatccagacgctgatttccttcgacggcacgctgagctcgtggtggacc
cgcatcgtggtcggcgcgctgctgttcgtcttctgtttgctgcaacgcttctttacctcg
cgcgctccacggcgctga
DBGET
integrated database retrieval system
