Variovorax sp. PMC12: C4F17_14100
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Entry
C4F17_14100 CDS
T05380
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_14100
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_14100
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AVQ84619
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All DBs
Position
1:3016239..3018374
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AA seq
711 aa
AA seq
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MFPTSSSPLPFARAFAALLALSPVTELLAQQAPDAGSANTLKTTEIHDQSEGAASGYAGP
RGGTAATRTETPLIEVPQAVRVVPRQLIEDLGATRLGDTIDYVSGIARLNDFGGTWDNFA
IRGFSNTEGGSLLNGFPSGRGYGPQRDVASVERVEFLKGPAAALYGSSEPGGTINIVTKK
PQFTAAHNVGVEFGTLGFRRTTLDTTGPLGSSFAYRLNAVAEDGASRSGLIDSRKQVLAP
ALTWTPDSRTVVQYEAELVRIRAPLDRGLIQINGNVGVLPRDRFLGEPDRDNMHIEGDTH
QLTVDRELGQGWRARVGASYRETRYFGDAVDLNSTLRADARTLNRRDSWRSLPSRDTSVQ
AEVEGKFSTGGIGHTLLAGVESWRLFMGQYGEYSSVARAPYAIDIYQPLYGQARTAPLSP
LFNTRDDQRATGVFVQDQIDLSPQWKLLAGVRFDRFHQDYDDLLARKSTAQSHSATSPRV
GITYLVSDRLSFYASAGKSFKPNSGGDENGNAFAPQSGRALEAGAKWLSADERLTATMAV
FDIRKSNVLTRSPTNANFNVAAGQARSRGIEADVAGQLDAHWRLTGNLAYTDTEVTRDNN
PAMLGRRLANIPRVSGGLFAIREDRLFDGRYGIGGGVVHVGERTGNATDTYRLPAYTTVR
LTAYWQINPRVRVTLDVNNLFDKTFYVASWNNLTVLPGLGRQVVAGLQAKF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atttttccaacctcttcttctcctcttcctttcgcgcgtgcttttgccgccctgctggcg
ctgtcccctgtgaccgaactgctcgcgcagcaggcgccggatgccggctccgccaacacg
ctcaagacgaccgagatccacgaccagtcggagggcgcggcttccggctacgcaggcccg
cgcggcgggaccgcggcaacgcgcaccgagaccccgctgatcgaggtgccgcaggcggtg
cgggtggtgccgcgccagttgatcgaagacctgggcgcgacgcggctgggcgacaccatc
gactacgtcagcggcatcgcgcggctcaacgacttcggcggcacctgggacaacttcgcg
atccggggcttcagcaacacggaaggcggctcgctgctcaatggctttccctcgggccgg
ggctatggaccgcagcgcgacgtggcgagcgtcgaacgcgtcgaattcctcaagggcccg
gccgcggcgctctacggcagcagcgagcccggcggaaccatcaacatcgtgaccaagaag
ccgcaattcaccgccgcgcacaacgtcggcgtggagttcggcacgctgggcttccggcgc
acgacgctggacaccaccggcccgctgggcagcagcttcgcctatcggctcaatgcggtg
gccgaggacggcgccagccgcagcggcttgatcgacagccgcaagcaggtactggcaccg
gcgctcacctggactcccgacagccgcacggtggtgcagtacgaagccgaactcgtccgc
atccgcgcgccgctcgaccgcggcctgatccagatcaacggcaatgtcggcgttcttccg
cgcgaccgcttcctcggcgagcccgaccgggacaacatgcacatcgagggcgacacccat
caactgacggtggaccgcgagctgggccagggctggcgcgcccgggtcggcgcctcctac
cgcgagacccgctacttcggcgatgcggtcgatctcaacagcacgctgcgcgccgacgcc
cgcaccctcaatcgacgggacagctggcgcagcctgccgtcgcgcgacacgtcggtgcag
gccgaagtcgagggcaagttcagcacgggcggcatcggccacacgctgctggcgggcgtg
gagtcctggcggctcttcatgggtcagtacggcgagtattcgagcgtggccagggcgccg
tatgcgatcgatatctaccagccgctctacggccaggcccgcacggcgccgctctcgccc
ctgttcaacacacgcgacgaccagcgcgccaccggcgtcttcgtgcaggatcagatcgac
ctgtcgccgcaatggaagctgctggccggcgtgcgcttcgaccgcttccaccaggactac
gacgacctgctggcacgcaagtccaccgcccagagccattcggccacttcgccgcgcgtg
ggcatcacgtatctcgtgagcgaccggctgtccttctatgccagcgccggcaagtccttc
aagcccaattcgggcggagacgagaacggcaacgcgttcgcgccgcaatcgggccgcgcg
ctggaagccggcgccaaatggctgtcggccgacgagcggctgaccgccacgatggcggtg
ttcgacatccgcaagagcaacgtgctcacccgcagcccgaccaacgccaacttcaacgtg
gccgccggccaggcgcgcagccgcggcatcgaggccgacgtggccggccagctggacgcg
cactggcgcctcaccgggaacctggcctataccgacaccgaagtcacccgcgacaacaac
ccggccatgctcgggcgcaggctggccaacatcccgcgcgtcagcggcggcctgttcgcc
atccgcgaggacaggctcttcgacggccgctacggcatcggcggcggcgtggtgcatgtg
ggcgagcgcaccggcaacgccaccgacacctaccggctgcctgcctacaccaccgtgcgc
ctgacggcctactggcagatcaatccgcgcgttcgggtcaccctcgatgtcaacaacctg
ttcgacaagaccttctacgtcgcttcgtggaacaacctcacggtgctgcccggcctgggc
cggcaagtggtggcggggctgcaggcgaagttctga
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