Variovorax sp. PMC12: C4F17_14265
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Entry
C4F17_14265 CDS
T05380
Name
(GenBank) nitrate ABC transporter substrate-binding protein
KO
K15553
sulfonate transport system substrate-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam00920
Sulfur metabolism
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
C4F17_14265
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_14265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_14265
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Sulfonate transporter
C4F17_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMT1_2
NMT1
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AVQ82028
LinkDB
All DBs
Position
1:complement(3051770..3052780)
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AA seq
336 aa
AA seq
DB search
MNRFTRKAAALAAGLSLLAGSLAAHAEGQIRIAEQFGIVYLLLNVAQEQKLIEKHAKAAG
VDAKVEWVKLSGGSAVNDALLSGNIEIAGAGVGPLLTLWDRTKGKQNVKGVASLGNFPYY
LVTNNPNVKSIADFTDKDRIALPAVGVSVQSRVLQFASAKLWGDKEFNRLDKISVAVPHP
DAAAAIIKGGTEITGHFGNPPFQEQELAGNPNARIVLNSYQVLGGPSSATVLYATEKFRS
ENPKTYKAFVDALDEAAKFVTANPEKAADIYLKVSNAKLDRELLLKIIRNPEVQFKTTPQ
NTYPLAEFMHRVGAIRNKPASVKDYFFDDAQNVSGN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcttcacccgcaaagccgccgcgctcgccgccggcctcagtctcctggccggc
agcctggccgcgcatgccgagggccagatccgcatcgccgaacagttcggcatcgtctac
ctgttgctcaacgtggcgcaggagcagaagctcatcgagaagcacgccaaggcggccggt
gtggacgccaaggtcgaatgggtcaagctctcgggcggctcggcggtgaacgacgcgctg
ctgtccggcaacatcgagattgccggcgccggcgtggggccgctgctcacgctgtgggac
cgcaccaagggcaagcagaacgtgaagggcgtggcctcgctgggcaacttcccgtactac
ctggtgaccaacaatccgaacgtgaagtcgatcgccgacttcaccgacaaggaccgcatc
gcgctgcccgcggtgggcgtgtcggtgcagtcgcgcgtgctgcagttcgcttcggccaag
ctgtggggcgacaaggagttcaaccggctcgacaagatcagcgtggcggtgccgcacccc
gacgcggccgcggccatcatcaagggcggcaccgagatcacgggccacttcggcaatccg
ccgttccaggagcaggagctggcgggcaatccgaatgcgcgcatcgtgctcaactcgtac
caggtgctgggcgggccgtcgtcggccacggtgctctatgcgacggagaaattccgcagc
gagaacccgaagacctacaaggctttcgtcgatgcgctcgacgaggccgcgaagttcgtc
accgccaatccggagaaggcggcggacatctacctgaaggtgagcaacgccaagctcgac
cgcgagctgctgctgaagatcatcaggaaccccgaggtgcagttcaagaccacgccgcag
aacacctatccgctggcggagttcatgcaccgggtgggcgcgatcaggaacaagccggct
tcggtgaaggactacttcttcgacgatgcgcagaacgtttcggggaactga
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