Variovorax sp. PMC12: C4F17_14295
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Entry
C4F17_14295 CDS
T05380
Name
(GenBank) tRNA 2-thiocytidine(32) synthetase TtcA
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_14295
Transfer RNA biogenesis [BR:
vam03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
C4F17_14295
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Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
AVQ82033
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All DBs
Position
1:3057034..3057966
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AA seq
310 aa
AA seq
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MNAVWIDEAPAAADATANSLKIERETHKLEKRLCRQVGQAIVDYNMIEEGDKVMVCVSGG
KDSYALLDILLKLKARAPIHFDIVAVNLDQKQPGFPEEVLPRYLSELGVDFHIENQDTYS
IVKRVIPEGKTTCGLCSRLRRGILYRVADELGATKVALGHHRDDMLQTFFLNMFFAGKLK
SMPPKLVSDDGKHVVIRPLAYVAEKDTVRWAQHREFPIIPCTLCGSQENLQRKQVGEMLR
EWDKKYPGRVENMFTALQNVVPSHLLDGTRHDFKGLKATGVADDDGDKAFDTPSFDLLSQ
APSALRIVQG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtctggatcgacgaggcgcccgccgccgccgacgccactgccaattccctc
aagatcgaacgcgagacgcacaagctcgaaaagcgcctgtgccgccaggtcgggcaggcc
atcgtcgactacaacatgatcgaggagggcgacaaggtcatggtgtgcgtctcgggcgga
aaggacagctacgcgctgctcgacatcctgctcaagctgaaggcgcgcgcgcccattcac
ttcgacatcgtggcggtcaacctcgaccagaagcagcccggctttcccgaagaagtgctg
cccaggtacctgagcgaactgggcgtggacttccacatcgagaaccaggacacctacagc
atcgtcaagcgcgtcattcccgagggcaagaccacctgcggcctgtgcagccggctgcgc
cgcggcatcctgtaccgcgtggccgacgagctgggcgccaccaaggtcgcgctgggccac
caccgcgacgacatgctgcagaccttcttcctcaacatgttctttgccggcaagctcaag
agcatgccgcccaagctggtgagcgacgacggcaagcacgtcgtgatccgcccgctggcc
tacgtggccgagaaagacaccgtgcgctgggcccagcaccgcgagttcccgatcattccg
tgcaccctgtgcggcagccaggaaaacctgcagcgcaagcaggtcggcgaaatgctgcgc
gagtgggacaagaagtaccccggccgcgtcgagaacatgttcaccgcgctgcagaacgtg
gtgccttcgcacctgctcgacggaacacggcacgatttcaagggtctcaaggcgaccggc
gtggcggatgacgacggcgacaaggccttcgacacgccttccttcgacttgctctcccag
gcaccctcagcactgcgcatcgtccagggctga
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