Variovorax sp. PMC12: C4F17_14325
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Entry
C4F17_14325 CDS
T05380
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vam03016
]
C4F17_14325
Enzymes [BR:
vam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
C4F17_14325
Transfer RNA biogenesis [BR:
vam03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
C4F17_14325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82039
LinkDB
All DBs
Position
1:3064540..3065901
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AA seq
453 aa
AA seq
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MKKVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFS
DLGRVKHLKAKGVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDRERLDR
PQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGEEVNRPLDDVLV
EIAGLADQGVREITLLGQNVNAYRGRMGDTAEIADFALLIEYVAEIPGIERIRYTTSHPN
EFTPRLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPELTL
SSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAALHDDTPHEVKLARL
HTLQSVIDANVKRFGQALVGTTQRVLVEGASRKDANELMGRTACNRVVNFEGDARLVGQM
TDLRITRSLAYTLRGEVLTSESPMSPAPTALAH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtattcatcaagaccttcggctgccagatgaacgagtacgactcggacaag
atggccgacgtgctcaacgccgcgcagggctacgagcccacgcagaacgtggatgaggcc
gacctcatcctgttcaatacctgctcggtgcgcgagaaggcccaggagaaggtgttctcc
gacctcggccgcgtgaagcacctgaaggccaagggcgtgaagatcggcgtgggcggctgc
gtggccagccaggagggccaggccatcatcgcgcgcgcgccgtatgtcgacatcgtgttc
ggcccgcagacgctgcaccgcctgcccgagatgctgaacgaccgcgagcgcctggaccgc
ccgcaggtggacatcagcttccccgagatcgagaagttcgaccacctgccgcccgcgcgc
gtggaaggcgccaccgccttcgtgtcgatcatggaaggctgctccaagtactgcagctac
tgcgtggtgccctacacccgcggcgaggaagtgaaccgcccgctcgacgacgtgctcgtc
gagatcgccggcctggccgaccagggcgtgcgcgagatcacactgctgggccagaacgtg
aatgcctaccgcggcaggatgggcgacaccgccgaaattgccgacttcgcgctgctgatc
gaatacgtcgccgagatccccggcatcgagcgcatccgctacaccaccagccaccccaac
gagttcacgccccgcctgatcgaggcctacgccaaggtgccgcagctcgtgagccacctg
cacctgccggtgcagcacggcagcgaccgcatcctgatggccatgaagcgcggctacacc
gccatggaatacaagagcacgatacgcaagctgcgcgccatccggcccgaacttaccctg
agcagcgacttcatcgtcggcttccccggcgagaccgacgacgacttcaacaagatgatg
aagctgatcgacgactgccagttcgatgccagcttcagcttcatcttcagcccgcgcccc
ggcacgccggccgccgcgctgcacgacgacacgccgcatgaagtgaagctcgcgcgcctg
cacacgctgcagtcggtcatcgatgccaacgtcaagcgcttcggccaggcgctggtcggc
accacgcagcgcgtgctggtggaaggcgcgtcgcgcaaggacgcgaacgaactcatgggc
cgcaccgcctgcaaccgcgtcgtcaacttcgagggcgacgcgcgcctggtcggccagatg
accgacctgcgcatcacccgctcgctggcctacacgctgcgcggcgaggtgctgacgagc
gagtcgcccatgtccccagcccccacggcgctcgcccactga
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