Variovorax sp. PMC12: C4F17_14385
Help
Entry
C4F17_14385 CDS
T05380
Name
(GenBank) PAS domain-containing sensor histidine kinase
KO
K02668
two-component system, NtrC family, sensor histidine kinase PilS [EC:
2.7.13.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_14385
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vam01001
]
C4F17_14385
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vam02022
]
C4F17_14385
02035 Bacterial motility proteins [BR:
vam02035
]
C4F17_14385
Enzymes [BR:
vam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
C4F17_14385
Protein kinases [BR:
vam01001
]
Histidine kinases
NtrC family
C4F17_14385
Two-component system [BR:
vam02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
C4F17_14385
Bacterial motility proteins [BR:
vam02035
]
Pilus system
Twitching motility proteins
C4F17_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
6TM_PilS
PAS_4
ADH_zinc_N
PAS_8
PAS
Diguanyl_cycl_sensor
CarD_C
Motif
Other DBs
NCBI-ProteinID:
AVQ82051
LinkDB
All DBs
Position
1:3079390..3081087
Genome browser
AA seq
565 aa
AA seq
DB search
MSSPLWSRGEPVTDWDVLELGGSESTALIRLWRGFMAARCFVALVLVLLQGVAFALGQTM
QPLAIGISAVYLVTAWLTMRYTRLQPPIRGFTAPWLLTVGVDLAAFTTLQVMQGGNVNYT
PLFALPVLMSAVLGTVVVGLGTTSTVTLLLLADAGWHWLQQPVDSSGRFVQAALTGTGLF
VVALLAHELARRLAREEAVAQRNRSSAQMQAQVNDLVIETLSEGVLVIDAEGLVHAANPA
ADAILGQGLAKLTLPFPLHAQPAWHALAALARQTFARRAPQSEEIPVAQARGAAREVRVR
TRLTPADDKRLDSLCVMFLQDLRELEARIRTEKLAAMGRMSAAVAHEIRNPLAAITQASA
LLNEDLTDPAHRKLTSMVQHNAQRLARIVDDVLDVSRARQQRVLSLGEQVVLDPAVQVLA
EEWIRQTQRKGVQVSLDAAGSDVRFDAEHLRRLLVNLLDNASRYAGKREGSIQVLTSLQR
GTSGRPALMVWSDGAPLEPAVQRHLFEPFFSSESRSSGLGLFLCRELCRRHGATIGYERR
AMVQGGPEGNEFFVSFAASENRLTQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcccctctggtcgcgcggcgagcctgtcaccgactgggacgtgctcgagctc
ggcggcagcgaaagcaccgccctcatccggctgtggcgcggcttcatggccgcgcgttgc
ttcgtcgcgctggtgctggtgctgcttcagggcgtggcctttgcgctcgggcagacgatg
cagccgctggccatcgggatttccgccgtctacctggtcactgcctggctgaccatgcgc
tacacgcgcctgcagccgccgatccggggcttcaccgcgccgtggctgctcaccgtcggc
gtcgacctggccgccttcaccacgctgcaggtgatgcagggcggcaacgtcaactacacg
ccgctgttcgcgctgccggtgctcatgagcgcggtgctcggcacggtggtggtgggcctg
ggcaccacgtccaccgtcacgctgctgctgctggccgacgcgggctggcactggctgcag
cagcccgtcgactcgtcgggccgcttcgtgcaggcggcgctcaccggcaccgggcttttc
gtggtggccctgctggcgcacgaactggcacgccggctcgcgcgcgaagaggcggtggcg
cagcgcaaccgcagcagcgcgcagatgcaggcgcaggtcaacgacctggtgatcgagacg
ctgagcgaaggcgtgctggtgatcgacgccgaagggctggtgcacgcggccaacccggcg
gccgacgcgatcctcgggcaggggctggcgaagctgacgctgcctttccccctgcacgca
cagcccgcctggcatgcgctggccgcgctggcgcgccagaccttcgcgcgccgggcgccc
cagtcggaagaaattccggtggcgcaggcgcgcggcgcggcccgcgaggtgcgcgtgcgc
acccggctcacacccgccgacgacaagcggctcgacagcctgtgcgtgatgttcctgcag
gacttacgtgaactcgaggcccgcatccgcaccgagaagctggcggcgatgggccgcatg
tccgccgcggtcgcccatgaaatccgcaatccgctggccgccatcacgcaggccagcgcg
ctgctcaacgaagacctgaccgaccccgcgcaccgcaagctcacgagcatggtgcagcac
aacgcgcagcggctcgcgcgcatcgtggacgacgtgctcgacgtttcccgggcgcgccag
cagcgcgtgctgtcgctgggcgagcaggtcgtgctcgaccccgcggtgcaggtgctggcc
gaggaatggatccgccagacgcagcgcaagggcgtgcaggtgtcgctcgatgcggctggc
agcgacgtgcgtttcgacgccgagcacctgcgccggctgctggtgaacctgctcgacaac
gcatcgcgctacgccggcaagcgcgaaggctcgatccaggtgctgaccagccttcagcgc
ggcacctcgggccgccccgccctgatggtgtggagcgacggcgcgccgctggagcccgcg
gtgcagcggcacctgttcgagccgtttttctcgtcggaaagccgctccagcggactcggc
ctgttcctgtgccgcgagctgtgccggcgccacggcgccaccatcggctacgagcggcgc
gcgatggtccagggcggcccggagggcaacgaattcttcgtgagcttcgccgccagcgaa
aaccggctgacacaatag
DBGET
integrated database retrieval system
