Variovorax sp. PMC12: C4F17_14595
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Entry
C4F17_14595 CDS
T05380
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00300
Lysine biosynthesis
vam00550
Peptidoglycan biosynthesis
vam01100
Metabolic pathways
vam01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C4F17_14595
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4F17_14595
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
C4F17_14595
Enzymes [BR:
vam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
C4F17_14595
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PAC2
FBF1
Motif
Other DBs
NCBI-ProteinID:
AVQ82092
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Position
1:complement(3128471..3129913)
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AA seq
480 aa
AA seq
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MTDTTPLGITLAQVQQWIPGARLVGDASTVVARVHTDTRTLAAGDLFVALKGERFDANEF
LAEAKKQGAVAAIAHHGLEAAGLAGLEVPDTLAALGALGAGWRAQFDLPLIAVTGSNGKT
TVTQMIAAILFAFRAERALATAGNFNNEIGVPLTLLRLRAQHQRAVLELGMNHPGEIARL
AAISRPTIALVNNAQREHQEFMATVEAVAIENASVFAVLPDDGTAVFPHGDAFTSLWTDM
AHAGGSRRCMTFGESEDADISLDSAEWKQGAWAVRIRTPIGGFDARLHIAGRHNVVNALA
ATACALAAGVSTDIIAAGLSAFEPVKGRSRASEIVVDGGRAVTLVDDSYNANPDSVIAAI
DVLAALPGPRLLVLGDMAEVGERSTEFHAEVGDWARHRGIEAVYTLGSATAHTVAAFRGD
ADGRHFNEFDALGAAVLARLPHVGSVLVKGSRSMKMERVVQAIAAQARQPQQQKEAGHDA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccacgccgctcggcatcacgctggcacaggtgcagcaatggattcccggc
gcgcgcctggtgggcgacgcctcgaccgtcgtcgcccgcgtgcacaccgacacccgcacg
ctcgcggccggcgacctgttcgtcgcgctcaagggcgagcgcttcgacgccaacgaattt
ctcgccgaggcgaagaagcagggcgccgtcgccgccatcgcccaccacggccttgaggcc
gcgggcctggccggcctggaggtgcccgacacgctggcagcgctgggcgcgctcggcgct
ggctggcgtgcacagttcgacctgccgctgatcgccgtgaccggcagcaacggcaagacc
acggtcacgcagatgatcgcggcgatcctgttcgccttccgggccgagcgcgcgctggcc
acggccggcaacttcaacaacgagatcggcgtgccgctcacgctgctgcgcctgcgcgcg
cagcaccagcgcgcggtgctcgaactgggcatgaaccatccgggcgagatcgcgcggctg
gccgccatttcgcgcccgaccatcgcgctggtcaacaacgcgcagcgcgagcaccaggag
ttcatggccaccgtcgaggcggtggccatcgagaacgcctcggtgttcgcggtgctgccc
gacgacggcacggccgtctttccgcacggcgacgccttcacctcgctgtggaccgacatg
gcgcacgccggcggctcgcgccgctgcatgaccttcggcgaatcggaagacgccgacatc
tcgctcgacagcgccgaatggaagcagggcgcctgggccgtgcgcatccgcacgcccatc
ggcggcttcgacgcgcgcctgcacatcgcgggccgccacaacgtcgtcaacgcgctcgcg
gccacggcctgcgcgctcgcggccggcgtgtccaccgacatcatcgccgcgggcctgagc
gccttcgagccggtcaagggccgttcgcgcgccagcgagatcgtggtggacggcggccgc
gcggtcacgctggtcgacgacagctacaacgccaatcccgattccgtgattgccgccatc
gacgtgctcgccgccctgccgggcccgcgcctgctggtgctcggcgacatggccgaggtg
ggcgagcgctcgaccgagttccacgccgaggtcggcgactgggcgcgccaccgcggcatc
gaggccgtctacaccctcggcagcgccacggcccacaccgtcgccgcgttccggggcgat
gccgacggccgccatttcaacgagttcgacgcgctcggcgccgccgtgctcgcccggctg
ccgcatgtcggcagcgtgctcgtcaagggctcgcgctccatgaagatggaacgcgtggtc
caggccatcgcggcccaggcacgacaaccacaacaacaaaaggaggccggtcatgacgca
tga
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