Variovorax sp. PMC12: C4F17_14605
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Entry
C4F17_14605 CDS
T05380
Name
(GenBank) penicillin-binding protein 2
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00550
Peptidoglycan biosynthesis
vam01100
Metabolic pathways
vam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C4F17_14605
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C4F17_14605
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
C4F17_14605
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vam03036
]
C4F17_14605
Enzymes [BR:
vam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C4F17_14605
Peptidoglycan biosynthesis and degradation proteins [BR:
vam01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
C4F17_14605
Chromosome and associated proteins [BR:
vam03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C4F17_14605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AVQ82094
LinkDB
All DBs
Position
1:complement(3131469..3133223)
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AA seq
584 aa
AA seq
DB search
MTRGNRSVRYTTSPLLASKTPVWRSKFIVAGIAFGFVMLAARAAYVQVFNNSFFQRQGEV
RFARTLEMPANRGRILDRNGLILASSVVAPSIWAIPEDIERDDPEVRAKLKQVAKLLEMP
QKDFDKKLEDEDKTFVWVKRQVDEPIAKQIAAMNIKGLYQRKEYKRQYPEGEAAAHVVGF
TNVEDSGQEGIELAFNKELAGKAGSRRVIKDRLGRVVEGVGELVPPLDGQDIQLSVDSKV
QFFAYQKLRDAVIARKAKAGSVVVLDSTTGEVLALANYPSYVPDKRQNLTGEQLRNRALT
DTFEPGSTMKPITVGMALEAGRVKPSTVIDTAPGRYQIGGFTISDTHNYGALTVEGVIQK
SSNVGALKIAQKMTPHEMWDTYTALGYGQKPQIQFPGAVTGRLRPWKTWKPVEQATMAYG
YGLSASLFQMAHSYTSFAHDGSLIPVTILKNSEPPAGVRVFSPSNALAVRKMLQMAAGPG
GTGTRAQTVGYSVGGKSGTAHKQVGKGYASNKYRAWFTGMAPIEKPRIIVAVMIDEPSDG
QYFGGLAAAPVFSEVVQQTLRMMNVPPDLAVKPLVMTQGVDESF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacccggggcaaccgcagcgtgcgctacaccaccagtcccttgctcgcgagcaagacg
ccggtctggcgcagcaagttcatcgtggccggcatcgccttcggcttcgtcatgctggcc
gcccgcgccgcgtacgtgcaggtgttcaacaacagcttcttccagcggcagggcgaggtg
cgcttcgcgcgcacgctcgagatgccggccaaccgcggccgcatcctcgaccgcaacggc
ctcatcctcgcgtccagcgtggtggcgcccagcatctgggccattcccgaagacatcgag
cgcgacgaccccgaggtgcgcgccaagctcaagcaggtggccaagctgctcgagatgccg
cagaaggatttcgacaagaagctcgaggacgaggacaagaccttcgtctgggtgaagcgc
caggtcgacgaacccatcgccaagcagatcgccgcgatgaacatcaagggcctctaccag
cgcaaggaatacaagcgccagtaccccgagggcgaggccgcggcgcacgtggtgggcttc
accaacgtggaagacagcggccaggaaggcatcgagctcgcgttcaacaaggaactggcg
ggcaaggccggctcgcgccgcgtcatcaaggaccgcctgggccgcgtggtcgagggcgtg
ggcgaactggtgccgccgctcgacggccaggacatccagctcagcgtcgacagcaaggtg
cagttcttcgcctaccagaagctgcgcgacgccgtgattgcgcgcaaggccaaggccggc
agcgtggtggtgctcgactccaccaccggggaggtgctggcgctggccaactacccgagc
tacgtgcccgacaagcgccagaacctcaccggcgagcagctgcgcaaccgcgcgctcacc
gacaccttcgagcccggctcgaccatgaagcccatcacggtcggcatggccctggaagcc
ggccgcgtgaagccgtcgacggtgatcgacaccgcgcccgggcgctaccagatcggcggc
ttcaccatcagcgacacccacaactacggcgcgctgacggtcgagggtgtgatccagaag
tcgagcaacgtgggcgcgctcaagatcgcacagaagatgaccccgcacgagatgtgggac
acctacaccgcgctcggctacggccagaagccgcagatccagttccccggcgcggtgacg
ggccgcctgcgcccgtggaagacctggaagccggtcgagcaggccaccatggcctacggc
tacggcctgtcggcttcgctgttccagatggcgcattcgtacacctcgttcgcgcacgac
ggctcgctcattccggtcaccatcctcaagaactccgagccgccggccggcgtgcgggtg
ttctcgccgtcgaacgcgctggccgttcgcaagatgctgcagatggccgccggccccggc
ggcaccggcacgcgcgcgcagacggtgggttactcggtcggcggcaagtcgggcaccgcc
cacaagcaggtcggcaagggttacgccagcaacaaataccgtgcgtggttcaccggcatg
gcgccgatcgagaagccgcgcatcatcgtcgccgtgatgatcgacgagcccagcgacggc
cagtatttcggcggcctggcagcggctcccgtgttcagcgaagtcgtgcagcagaccctg
cgcatgatgaacgtaccgcccgacctggcggtcaaaccgcttgtgatgacgcagggcgtc
gacgagagtttctga
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