KEGG   Variovorax sp. PMC12: C4F17_14660
Entry
C4F17_14660       CDS       T05380                                 
Name
(GenBank) recombinase XerC
  KO
K03733  integrase/recombinase XerC
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vam03036]
    C4F17_14660
Chromosome and associated proteins [BR:vam03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    C4F17_14660
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 DUF3435
Other DBs
NCBI-ProteinID: AVQ82103
LinkDB
Position
1:complement(3144227..3145243)
AA seq 338 aa
MSSVASSSEPSGPATPAVSADSGWVEKYLEHVRVERRLAARTVELYAFHLKSLTNHAAEA
KLPLDRVQTAHIRRWMAQLHGAGREPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHAP
KAGKPLPKALGVDDAVRLAELYDPEADPWTEARDSAIVEMLYGCGLRVSELTGLDAQASS
TARGWVDLDAGDANVLGKGSKRRIVPMGSKAAEAVRDWLAVRGDCAALATSHLRDPQAAA
ALFISAKGVRMSSQAVWKLLRERSLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQELL
GHANISTTQVYTRLDFQHLAKAYDAAHPRAKARPENDK
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgtcttccgtggcttcctcttctgagccctccgggcccgcgacgccggccgtttccgca
gattccggctgggtcgaaaaatacctcgagcatgtgcgcgtcgagcgccggctcgcggcg
cgcactgtcgagctgtacgccttccacctgaagtcgctgaccaaccacgccgccgaggcg
aagctgccgctggaccgcgtgcagaccgcccacatccgccgctggatggcgcagctgcac
ggcgcggggcgcgagccgcgcggcattgcgctggtgctgtcgtgctggcgcagcttctac
cgctggctcggccatgaagggctggtcggcttcaacccggtgcaggacgtgcatgcgccc
aaggccggcaagcccttgcccaaggcgctgggcgtggacgacgcggtgcgcctggccgag
ctgtacgaccccgaggccgacccctggaccgaggcgcgcgacagcgccatcgtcgaaatg
ctctacggctgcggcctgcgcgtgagcgagctcacggggctcgacgcgcaggcgagcagc
acggcgcgcggctgggtcgacctggatgcgggcgacgccaacgtgctcggcaagggcagc
aagcgccgcatcgtgccgatgggcagcaaggcggccgaggcggtgcgcgactggctcgcg
gtgcgcggcgactgcgccgcgctggccacctcgcacctgcgcgacccgcaggccgccgcc
gcgctcttcatcagcgccaagggcgtgcggatgtcgtcgcaggcggtgtggaagctgctg
cgcgaacgcagcctcaaggccggcctcgctgcgccggtgcatccgcacatgctgcggcat
tccttcgccagccacgtgctgcagtcgagcagcgacctgcgcgcggtgcaggagctgctc
ggccacgccaacatctcgaccacgcaggtctacacgcggctggatttccagcatctggcc
aaggcctacgacgccgcgcatccgcgcgccaaggccaggccggagaacgacaagtaa

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