Variovorax sp. PMC12: C4F17_15075
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Entry
C4F17_15075 CDS
T05380
Name
(GenBank) TRAP transporter small permease
KO
K11689
TRAP-type transport system small permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_15075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_15075
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_15075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
DUF2627
DUF805
Motif
Other DBs
NCBI-ProteinID:
AVQ82175
LinkDB
All DBs
Position
1:3232636..3233199
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AA seq
187 aa
AA seq
DB search
MTTPPESGPTLDAASPIPPDIEAADEPTKVPLAIEDWLTVIIMGALALITFANVLVRYFT
DSSFAWTEEFSVFLMIMLALVAGSAAVARDRHIRIEYFSESGSMARRKRLAQFGALMIAI
LFTLIGALSIRMVWDDYRFEETTPGIGLPAWWYSIWLPIVSFAIALRAIGLMVRRGRKKN
YKSEDTK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacaactccacccgagtccggccccacgctggacgccgccagccccatcccccccgac
atcgaagccgccgacgaacccaccaaggtgccactggccatcgaagactggctcaccgtc
atcatcatgggcgccctggcgctcattacctttgccaacgtgctggtgcgctacttcacc
gattcgtccttcgcgtggaccgaagagttctcggtgttcctcatgatcatgctggcgctg
gtggccggctcggccgccgtggcgcgcgaccggcatattcgcatcgagtacttctccgaa
agcggctcgatggcgcggcgcaagcggctcgcgcagtttggcgcgctgatgatcgccatt
ctgttcaccctcatcggcgcgctcagcatccgcatggtgtgggacgactaccgctttgaa
gaaacgacgccgggcatcgggctgccggcgtggtggtattcgatctggctgcctatcgtg
tccttcgcgatcgcgctgcgcgccatcggcctcatggtccgccgcggccgcaagaaaaac
tacaagtcagaagacaccaagtga
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