Variovorax sp. PMC12: C4F17_15085
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Entry
C4F17_15085 CDS
T05380
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_15085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_15085
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_15085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
NMT1
TPR_EDRF1
PsbQ
Motif
Other DBs
NCBI-ProteinID:
AVQ82177
LinkDB
All DBs
Position
1:3234842..3235879
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AA seq
345 aa
AA seq
DB search
MKFRRTLLGLAAATTALGMFSTGAMAQAAYKPEYKMSLVLGPPTPWGQAGKIWADMVKER
TQGRINIKLYPGVSLIQGDQTREFSALRQGVIDMAVGSTINWSPQVKQLNLFSMPFLMPD
YAAIDALTQGEVGKEMFKTLDKAGVVPLAWGENGFREITNSKKPIRSPADIKGMKIRVVG
SPIYSDMFTALGANPTQMSWADAQPALASGAVDGQENPLFLFTVLKMQTVGQKFVTTWGY
VADPLVFVVNKEIWASWTPADQAIVRQAAIDAGKEEIAIARKGLVEADKPVLKDIAGMGV
TVTSLTPAEREAFVKATRPVYDKWKSTVGTDLVAKAEQAIAARKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccgccgcaccctgctcgggctcgccgcagcaaccaccgccctcggcatgttc
tcgaccggcgcaatggcgcaggccgcctacaagcccgaatacaagatgtccctcgtgctc
ggcccgcccaccccctggggccaggccgggaaaatctgggccgacatggtcaaagagcgc
actcagggccgcatcaacatcaagctctaccccggcgtctcgctcatccagggcgaccag
acccgcgagttcagcgcactgcgccagggcgtcatcgacatggcagtcggctccaccatc
aactggtcgccgcaggtcaagcagctcaacctgttctccatgcccttcctgatgcccgac
tacgcggccatcgacgcgctcacgcagggcgaggtcggcaaggaaatgttcaagacgctc
gacaaggccggcgtggtgccgctcgcgtggggcgaaaacggcttccgcgaaatcaccaac
tccaagaagcccatcaggtcgccggcagacatcaagggcatgaagatccgcgtggtcggc
tcgcccatctactccgacatgttcaccgcgctcggcgccaaccccacgcagatgagctgg
gccgacgcacagccggccctcgcgagcggcgcggtcgacggccaggagaacccgctgttc
ctgttcaccgtgctcaagatgcagaccgtgggccagaagttcgtcaccacctggggctac
gtggccgacccgctggtgttcgtggtcaacaaggaaatctgggcttcgtggacccctgcc
gaccaggccatcgtgcggcaggccgccatcgacgcgggcaaggaagagatcgccatcgcg
cgcaagggcctggtggaggccgacaagccggtgctgaaagacatcgcgggcatgggcgtg
acggtgacgagcctcacgccggcggagcgcgaagccttcgtgaaggcgacgcggccggtg
tacgacaagtggaagtcgaccgtgggcacggacctggtggcgaaggccgagcaggcgatt
gccgcgcgcaagaagtaa
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integrated database retrieval system
