Variovorax sp. PMC12: C4F17_15175
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Entry
C4F17_15175 CDS
T05380
Name
(GenBank) metal ABC transporter permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_15175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_15175
Transporters [BR:
vam02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C4F17_15175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_28
AAA_16
AAA_25
AAA_22
AAA_29
AAA
AAA_21
AAA_18
nSTAND3
AAA_33
ABC_ATPase
RsgA_GTPase
AAA_5
Zeta_toxin
NACHT
Cytidylate_kin
AAA_24
nSTAND1
MMR_HSR1
APS_kinase
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
AVQ82190
LinkDB
All DBs
Position
1:complement(3252728..3254560)
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AA seq
610 aa
AA seq
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MRRSGEALPPSHPASGHPPERSDRSDWATLRRLFPYLWQYKWRVAAALAFMVGAKVANVG
VPVLLKNLVDTMTPKPDMAQALLIVPIGLLLAYGLLRFSTSLFGELRELIFAKATEGTAR
QIALEVFRHLHALSLRFHLERQTGGMTRDIERGTRGVHSLISMSLYSIVPTIIELVLVLT
ILGVKFDSLFVWITAAALVLYIAFTVTVTEWRTKFRKTMNELDSVAQSRAVDSLLNYETV
KYFNNEDFEAGRYDASLDRYRKAAIKSQRTLSMLNTGQQLLIAVSLVLMLWRATSGVVEG
RMTLGDLVMVNAFMIQLYIPLNFLGVIYREIKQSLTDLDKMFVLMEKEREVRDAPGAQPL
AGADATVRFEDVSFAYEPARPILKHVSFEIPAGKTVAVVGPSGSGKSTLARLLYRFYDVQ
QGRITIGGEDIREVTQSSVRRAIGIVPQDTVLFNDTVEYNIAYGRPGASREEVEAAARAA
RIHDFIVATPKGYDTTVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANER
AIQSELKSAAQDKTTLVIAHRLSTVVDAHEILVLESGVIVERGTHAELLARQGRYAQMWA
LQKSEAVPML
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcagcggcgaagcccttcccccctcccaccccgcctccggccacccgccggag
cgcagcgaccgttccgactgggcgacgctgcgccgcctgtttccctacctctggcagtac
aagtggcgggtggccgccgcgctggccttcatggtgggcgccaaggtggccaacgtcggc
gtgccggtgctgctgaagaacctggtcgacaccatgacgccgaagcccgacatggcccag
gcgctgctcatcgtgcccatcggcctgctgctggcctacggcctgctgcgcttctcgacc
tcgctgttcggcgagctgcgcgagctgatcttcgccaaggccaccgagggcacggcccgg
cagatcgcgctggaggtgttccgccacctgcacgcgctgagcctgcgctttcacctggag
cgccagaccggcggcatgacgcgcgacatcgagcgcggcacgcgcggcgtgcattcgctc
atctcgatgtcgctctacagcatcgtgccgaccatcatcgagctggtgctggtgctcacc
atcctgggcgtgaagttcgattcgctgttcgtctggatcacggccgccgcgctggtgctg
tacatcgccttcaccgtgacggtgaccgaatggcgcaccaagttccgcaagaccatgaac
gagctcgactccgtggcccagagccgcgcggtcgattcgctgctgaactacgaaaccgtc
aagtacttcaacaacgaagacttcgaggccggccgctacgacgccagcctcgaccgctac
cgcaaggccgccatcaagagccagcgcacgctgagcatgctcaacaccgggcagcagctg
ctgatcgcggtgagcctggtgctgatgctgtggcgcgccacctcgggcgtggtggagggg
cgcatgacgctgggcgacctggtgatggtcaacgccttcatgatccagctctacattccg
ctgaacttcctgggcgtgatctaccgcgagatcaagcagagcctgaccgacctcgacaag
atgttcgtgctgatggaaaaggagcgcgaggtgcgcgacgcgcccggtgcgcagccgctt
gccggcgccgacgccaccgtgcgcttcgaggacgtgagctttgcctacgagcccgcgcgg
cccatcctcaagcatgtgagcttcgagatcccggccggcaagacggtggctgtggtcggg
ccttcgggctctggcaagtcgacgctggcgcggctgctttaccgcttctacgacgtgcag
caggggcgcatcaccatcggcggggaagacatccgcgaagtgacgcagtccagcgtgcgc
cgcgccatcggcatcgtgccgcaggacacggtgctcttcaacgacacggtcgaatacaac
atcgcctacggccgcccgggcgcgagccgcgaagaagtggaagccgccgcgcgcgccgcg
cgcatccacgacttcatcgtggccacgcccaagggctatgacaccaccgtgggcgagcgc
ggcctcaagctctccggcggcgagaagcagcgcgtggccattgcgcgcacgctgctgaag
aacccgccgatcgtgatcttcgacgaggccacctcggcgctcgactcggccaacgagcga
gccatccagtcggagctcaagagcgccgcgcaggacaagaccacgctggtcatcgcgcac
cgcctgtcgacggtggtggacgcgcacgagatcctggtgctggagtcgggcgtgatcgtc
gagcgcggcacgcatgcggagctgctcgccaggcagggccgctacgcgcagatgtgggct
ttgcagaagagcgaagcggttccgatgctctag
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