KEGG   Variovorax sp. PMC12: C4F17_15380
Entry
C4F17_15380       CDS       T05380                                 
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K01790  dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00521  Streptomycin biosynthesis
vam00523  Polyketide sugar unit biosynthesis
vam00541  Biosynthesis of various nucleotide sugars
vam01100  Metabolic pathways
vam01110  Biosynthesis of secondary metabolites
vam01250  Biosynthesis of nucleotide sugars
Module
vam_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    C4F17_15380 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    C4F17_15380 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    C4F17_15380 (rfbC)
Enzymes [BR:vam01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     C4F17_15380 (rfbC)
SSDB
Motif
Pfam: dTDP_sugar_isom
Other DBs
NCBI-ProteinID: AVQ82228
LinkDB
Position
1:complement(3298220..3298774)
AA seq 184 aa
MQTFPTLIPDVLVIEPKVFGDARGFFLESFNQQAFSQALGFSVEFKQDNHSRSTKGVLRG
LHYQVKQPQGKLVRVVRGAVFDVAVDIRPSSATFGKWVGVELNEDNHRQLWIPAGLAHGF
LVLSETADFLYKTTDYYAPAYERSIAWNDPAIGIEWPLAGATPALSAKDAAALSLAESIA
GEVF
NT seq 555 nt   +upstreamnt  +downstreamnt
gtgcaaacattccccacgctcattcccgacgtcctagtcatcgagccgaaagtattcggc
gatgcaaggggcttcttcttagagagcttcaaccagcaggcgttctcccaggccctcggt
ttctctgtggagtttaagcaagataatcactcacgttcgaccaaaggggtactgcgtggt
cttcattaccaagtcaagcagccccaaggcaaactggtccgcgtggtacgcggagcagtg
tttgacgttgccgtcgatattcggccgtcttcggcgacgttcggcaaatgggttggcgtg
gaactgaacgaagacaaccatcgtcaactctggattccggccggcctggcgcacggattt
ctagtgctgagcgaaacggccgacttcctatataagaccaccgactactacgcgcccgct
tacgagcgaagcatcgcttggaacgatcccgccatcggtatcgagtggccgctcgccggt
gccactccggcgttgtccgcaaaggatgctgcggcgctatcgcttgccgaaagcatcgcc
ggagaggtgttttga

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