Variovorax sp. PMC12: C4F17_15395
Help
Entry
C4F17_15395 CDS
T05380
Name
(GenBank) transketolase
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00030
Pentose phosphate pathway
vam00710
Carbon fixation by Calvin cycle
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01200
Carbon metabolism
vam01230
Biosynthesis of amino acids
Module
vam_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
vam_M00007
Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
C4F17_15395
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
C4F17_15395
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
C4F17_15395
Enzymes [BR:
vam01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
C4F17_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Transketolase_C_1
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
AVQ82231
LinkDB
All DBs
Position
1:complement(3300214..3301140)
Genome browser
AA seq
308 aa
AA seq
DB search
MRAAFSAALVEAATKDERVVLLTGDHGYALFDEFRKRCPGQYINAGIAEQNMVGVAAGLA
KAGFRPIVYGLSAFVPVRVVEQIKIDVCYEKLPVIFTGDGAGLVYSTLGTSHQSFEDIAC
LRSVPYIDIMSPCDAHELTACMSTALTLQSPVYMRMGKADLGAVHAKAPSLTRGELACVQ
RGQSRVHFIATGSMVKTACELGAELDVSVWSAPWIKPLDAGQLRALAASSSAFVTLEEHS
AAGGLGAAVLEAISETNPVPVLRIGVGERFSETCGSHAHAMREHGLDIASVRSRVAPFVG
KWAAFGAC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgctttttccgctgcgctggtagaagccgccaccaaggacgagcgcgtggtg
ctcctgactggcgaccatggctacgcccttttcgacgaattccgcaagcgctgccctggc
cagtacatcaatgccggcatcgccgagcagaacatggtcggtgttgccgccgggctggct
aaagcgggcttccggcccatcgtctacggtctgagcgcgttcgtgccggtgcgagttgtg
gagcagatcaagatcgacgtctgttacgagaagctgccggtcatcttcactggggacggc
gccgggctggtgtacagcactctgggcaccagccaccagagcttcgaggacatcgcctgc
ctgcggtcggtgccttatatcgacatcatgtcgccatgcgacgcgcacgagcttacggcc
tgcatgtcaacagcgctgacgctccagagcccggtttacatgcgcatgggcaaggctgac
ttgggcgcggtgcacgctaaggcgccttctctgacgcgtggcgaactggcttgcgtgcag
agggggcaatctcgtgtgcacttcatcgcgaccggctccatggtcaagaccgcatgcgag
ttgggcgctgagctcgacgtgtccgtgtggagcgcaccctggatcaagccgctagatgcc
gggcaactccgagcattggctgcaagcagcagcgcctttgtaacgctggaagagcactcg
gctgctggcgggctcggtgccgcagtgcttgaggcaatctcggagacgaaccccgttcct
gttctgcgtatcggtgtgggcgagcggttctcggagacctgcggctcgcatgcccacgcc
atgcgcgagcacgggctcgacatagcttcggtacgttcgcgcgtggcgccttttgtcggc
aaatgggcggcgttcggcgcatgctga
DBGET
integrated database retrieval system