Variovorax sp. PMC12: C4F17_15415
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Entry
C4F17_15415 CDS
T05380
Symbol
rfbG
Name
(GenBank) CDP-glucose 4,6-dehydratase
KO
K01709
CDP-glucose 4,6-dehydratase [EC:
4.2.1.45
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00541
Biosynthesis of various nucleotide sugars
vam01100
Metabolic pathways
vam01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C4F17_15415 (rfbG)
Enzymes [BR:
vam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.45 CDP-glucose 4,6-dehydratase
C4F17_15415 (rfbG)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AVQ82235
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Position
1:complement(3304324..3305406)
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AA seq
360 aa
AA seq
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MTPSFWRGKRVFLTGHTGFKGSWLALWLGKHGAIVRGYSLAPSTEPSLHALTMGRFSTET
QIADVRDLAALRAAINDFAPEIVFHLAAQPLVRRSYVDPVETYSTNVMGTVHLLEAARGC
NSIRAIVIVTSDKCYENREWQWGYRENEPMGGYDPYSNSKGCSELVVASYRSSFFNENRY
AEHGVALATARAGNVIGGGDWSQDRLVPDLLHAIAEGRRADIRNPNAIRPWQHVLEPLCG
YMMLAERLFAEGPTWAEPWNFGPADSDARPVAWLADQLVSLWGDGAAWRSIAQDGQPHEA
NWLKLDCSKARQTLGWIPRWDLRTSLGVIVDWQRAWLDGRDMADVTLEQIEKYESTPIHD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgactccatcgttttggcgcggcaagcgcgtgtttctcacgggtcacacaggcttcaag
ggaagttggctggcgttatggctgggaaaacatggagctatcgtccgcgggtactcgttg
gcgccgtcaacagagcccagcttgcatgcgctgaccatggggcggttctcgacggaaaca
cagattgcggacgtaagagacctcgccgcgctacgggccgccattaacgactttgcccct
gagatcgttttccatctagcggcccagccgcttgtgcgccgctcttatgttgatccagtg
gagacgtattccaccaacgtgatgggcaccgttcatctgcttgaggcggcgcgcggctgc
aacagcattcgcgccatcgtgatcgtcaccagcgacaagtgctacgagaatcgcgagtgg
caatggggctatcgcgagaatgagcccatgggaggttacgacccttacagcaatagcaag
ggttgctcggaactcgtggtagcctcataccggtcctcgttcttcaacgagaatcgctat
gcagagcacggtgttgcgctggccactgcgcgcgctggcaatgtgattggcggcggtgac
tggtctcaagatcggctggtgccggacctgctgcacgctattgcggaaggccggagagcg
gatatccgcaacccaaatgccatccggccttggcagcacgtactagagccgctttgcggc
tacatgatgttggccgagcgcctttttgctgaggggccgacttgggccgagccatggaat
ttcgggcctgcggattcggacgcgcgtcctgttgcctggcttgcagatcaactggtcagc
ctttggggtgacggtgccgcgtggcgcagtattgcgcaggatggtcagccgcatgaagcg
aactggctcaagctagattgctccaaggcccgacagacgttgggctggatccctcgatgg
gacttgcgcacgagccttggtgtcattgtcgattggcagcgggcttggcttgacggccgg
gacatggctgacgtgacccttgaacaaatcgaaaaatacgaaagtacccctatccatgac
tga
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