Variovorax sp. PMC12: C4F17_15545
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Entry
C4F17_15545 CDS
T05380
Symbol
pgaA
Name
(GenBank) poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
vam
Variovorax sp. PMC12
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Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_16
TPR_14
Motif
Other DBs
NCBI-ProteinID:
AVQ82258
UniProt:
A0A2P1VAR9
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Position
1:3333953..3336457
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AA seq
834 aa
AA seq
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MGASPAAFANPPIAATAPAANPSAAYGAQQHDALIAARRADRIGAAQALQQLKDWLAAPL
TDAERRRVVSDAVAIAATDSQFAEAIAFARQVPLASLNDYALGPLALAARRTHDLSLQGE
VIARWRARQPQAREPRIHEAFWKLDSGDVAGAKAIYDALARQPVPQVEDRVALLELRGAV
ARAEKQPLQALAAYTEAGALRPERRDLRRETDFLLADSGAASTAFDDADAAERAHPGSFS
PLALSTLQQQALAQRLRWAIEERDQRLGAARLTALDRVLADEETALARLDTSAAQAAPED
ADAWRQLRVRLLADRLLALVERGRPADAIALYESLRAAGTDLPFWGLGAAARAFAQERRS
IDAVPLYEAAVAKGGADLPMPDDLYFGLIYAYQDTGRFEDAEALLKRLEEATPALMRLSP
EAGRPNGQYTDVSGMRGLLQLYTDRAALAQQSFSTLTGEAPLNAGYAYGAGQTERLREHP
EAAVARFEAQAADQPYDISARAGHVEALLDAGEFRQARERAESLAADVPEAAEVRDVERK
RRAATGPRLDVDAEASSGGAAIANREWRIDSRLSSGLIDDQWRVFYDQTLGRGTTDIGNA
NWARGGLGLGWQQGRWLAEGVLQHANSGPYRNSVAGRVDYRAGDAWRLSATYDGDSKELP
WKARVAGIGARETGASVGYVVNESRRFDLQWQRLDFSDGNLRNGLELGWRERWVSTPRFQ
LETRLGAGTSRGRDIDTPYFNPSSDSTVQLAVRAQWLNWKRDDRQFFQAVELTGGNYRQA
GFGSGPLWSLRYEHRWDLGPKFTLRYGLSISSHPYDGVRERQRGVFLNLSMPLQ
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcttcacccgcggccttcgcgaatccgcccatcgcagccaccgcacccgcggcc
aacccatcggcggcctatggcgcgcagcagcacgacgccttgatcgcagcgcgccgcgcc
gaccgcatcggcgccgcgcaggctttgcagcagttgaaggactggctcgccgcgccgctc
actgacgccgaacgccggcgcgtggtgtccgacgcggtggccatcgcggcgaccgacagc
cagttcgccgaagccatcgcgttcgcccgccaagttccgctcgcctcgctgaacgactat
gcattgggcccgctcgcgctggccgcgcgccgcacgcatgacctgtcgctgcagggcgaa
gtcattgcccggtggcgcgcacggcagccgcaagcgcgcgagccgcgcatccacgaagct
ttctggaagctcgacagcggcgacgtcgccggcgccaaggcgatctacgacgccctcgcg
cggcaaccggtcccgcaggtcgaagaccgcgtcgccctgctcgagctgcgcggtgccgtg
gcgcgcgccgaaaagcaaccgctgcaggcgctcgccgcctacaccgaggccggcgcgctg
cggcccgagcgccgcgacctgcgccgcgaaaccgacttcctgctcgcggacagcggcgcc
gcatcgaccgcgttcgacgacgccgatgccgccgagcgcgcgcatcccggcagcttctcg
ccgctggcgttgtcgacgctgcagcagcaggcgctggcacagcggctgcgctgggccatc
gaggaacgcgaccagcgcctgggcgcggcacgcctgacggcactcgaccgcgtgctggcc
gacgaggaaaccgcgctggcccggctagacacatcggccgcccaggccgcgccggaagat
gccgacgcatggcgccagttgcgcgtgcggctgctggccgaccggctgctggcgctggtg
gagcgtggccgccccgcggatgccatcgcgctctacgaatcgctgcgcgctgccggtacc
gacctgcccttctggggcctcggtgccgcggcccgcgccttcgcgcaggagcgccgctcg
atagacgccgtgccgctctacgaagcggccgtggccaagggtggcgccgacctgccgatg
cccgacgacctgtatttcggcctgatctacgcctaccaggacaccggccgcttcgaggac
gccgaggcgctgctcaagcggctcgaagaagccacgccggcgctgatgcgcctctcgccc
gaagccggccggcccaacggccagtacaccgacgtgagcggcatgcgcggcctgctgcag
ctctacaccgaccgcgcggcactcgcgcagcagagcttctcgacgctgaccggcgaagcg
ccgctgaacgccggctacgcctacggcgcgggccagaccgagcggctgcgcgagcacccc
gaggccgccgtcgcgcgcttcgaggcacaggccgccgaccagccctacgacatcagcgcg
cgcgccggccatgtcgaggcactgctcgacgccggtgaattccgccaggcccgcgaacgc
gcagagtcgctcgcggccgacgtgcccgaggccgccgaggtgcgagacgtggagcgcaag
cgccgcgccgccaccggtccgcgtctcgatgtcgacgccgaggcctcgtcgggcggcgcg
gccatcgccaaccgcgagtggcgcatcgacagccgcctcagctccggcctcatcgacgac
cagtggcgcgtgttctacgaccagacgctgggccgcggcaccaccgacatcggcaacgcc
aactgggcgcgcggcggcctgggcctgggctggcagcagggccggtggctggccgaaggc
gtgctgcagcacgcgaacagcggcccctaccgcaacagcgtggcgggccgcgtcgactac
cgcgcgggcgacgcatggcgcctctcggccacctacgacggcgacagcaaggagctgccg
tggaaggcccgcgtcgccggcatcggcgcgcgcgagaccggcgcgagcgtgggctacgtg
gtgaacgaatcgcgccgcttcgacctgcaatggcagcgcctggacttcagcgacggcaac
ctgcgcaacggcctggagctgggctggcgcgaacgctgggtgagcacgccgcgcttccag
ctcgagacccgcctgggcgccggcaccagccgcggccgcgacatcgacacgccctacttc
aacccgtcgagcgacagcaccgtgcaactggcggtgcgcgcgcagtggctcaactggaag
cgcgacgaccgccagttcttccaggccgtggagctcacgggcggcaactaccgccaggcc
ggcttcggcagcggcccactgtggagcctgcgctacgagcaccgctgggacctcggcccc
aagttcacgctgcgctacggcctgagcatttccagccatccctacgacggcgtgcgcgag
cgacagcgcggcgtcttcctgaacctctcgatgcccctgcagtga
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